emdata_modular.h

Go to the documentation of this file.

/*
 * Author: Steven Ludtke, 04/10/2003 (sludtke@bcm.edu)
 * Copyright (c) 2000-2006 Baylor College of Medicine
 *
 * This software is issued under a joint BSD/GNU license. You may use the
 * source code in this file under either license. However, note that the
 * complete EMAN2 and SPARX software packages have some GPL dependencies,
 * so you are responsible for compliance with the licenses of these packages
 * if you opt to use BSD licensing. The warranty disclaimer below holds
 * in either instance.
 *
 * This complete copyright notice must be included in any revised version of the
 * source code. Additional authorship citations may be added, but existing
 * author citations must be preserved.
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
 *
 * */
 
#ifndef emdata__modular_h__
#define emdata__modular_h__
 
public:
void process_inplace(const string & processorname, const Dict & params = Dict());
 
void process_inplace(Processor * p);
 
EMData * process(const string & processorname, const Dict & params = Dict()) const;
 
EMData * process(Processor * p) const;
 
float cmp(const string & cmpname, EMData * with, const Dict & params = Dict());
 
EMData *align(const string & aligner_name, EMData * to_img,
                          const Dict & params = Dict(), const string & cmp_name = "",
                          const Dict& cmp_params = Dict());
 
vector<Dict> xform_align_nbest(const string & aligner_name, EMData * to_img,
                          const Dict & params = Dict(), const unsigned int nsoln = 1, const string & cmp_name = "dot",
                                                                                 const Dict& cmp_params = Dict());
 
EMData *project(const string & projector_name, const Dict & params = Dict());
 
EMData *project(const string & projector_name, const Transform & t3d);
 
EMData *backproject(const string & projector_name, const Dict & params = Dict());
 
//#ifdef EMAN2_USING_CUDA
//vector<EMData*> cuda_project(const vector<Transform> transforms);
//#endif // EMAN2_USING_CUDA
 
#endif  //emdata__modular_h__