reconstructor_tools.h File Reference

#include "emdata.h"
#include "interp.h"
#include <string>
#include <cstdlib>
#include <iostream>

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Namespaces
namespace	EMAN
Classes
class	EMAN::FourierPixelInserter3D
	FourierPixelInserter3D class defines a way a continuous pixel in 3D is inserted into the discrete 3D volume - there are various schemes for doing this including simply finding the nearest neighbor to more elaborate schemes that involve interpolation using the nearest 8 voxels and so on. More...
class	EMAN::FourierInserter3DMode1
	FourierPixelInserter3DMode1 - encapsulates "method 1" for inserting a 2D Fourier slice into a 3D volume See comments in FourierPixelInserter3D for explanations. More...
class	EMAN::FourierInserter3DMode2
	FourierPixelInserter3DMode2 - encapsulates "method 2" for inserting a 2D Fourier slice into a 3D volume See comments in FourierPixelInserter3D for explanations. More...
class	EMAN::FourierInserter3DMode3
	FourierPixelInserter3DMode3 - encapsulates "method 3" for inserting a 2D Fourier slice into a 3D volume See comments in FourierPixelInserter3D for explanations. More...
class	EMAN::FourierInserter3DMode4
	FourierPixelInserter3DMode4 - encapsulates "method 4" for inserting a 2D Fourier slice into a 3D volume See comments in FourierPixelInserter3D for explanations. More...
class	EMAN::FourierInserter3DMode5
	FourierPixelInserter3DMode5 - encapsulates "method 5" for inserting a 2D Fourier slice into a 3D volume See comments in FourierPixelInserter3D for explanations. More...
class	EMAN::FourierInserter3DMode6
	FourierPixelInserter3DMode6 - encapsulates "method 6" for inserting a 2D Fourier slice into a 3D volume See comments in FourierPixelInserter3D for explanations. More...
class	EMAN::FourierInserter3DMode7
	FourierPixelInserter3DMode7 - encapsulates "method 7" for inserting a 2D Fourier slice into a 3D volume See comments in FourierPixelInserter3D for explanations. More...
class	EMAN::FourierInserter3DMode8
	FourierPixelInserter3DMode8 - encapsulates "method 8" for inserting a 2D Fourier slice into a 3D volume See comments in FourierPixelInserter3D for explanations. More...
class	EMAN::InterpolationFunctoid
	InterpolationFunctoid is an abstract base class, having basically one function which is "operate(float radius)" It simplifies the implementation of InterpolatedFRC::continue_frc_calc? (where ? = 3,4,6 or 7) The other cases (1,2 and 5) must be handled case by case. More...
class	EMAN::InterpolationFunctoidMode3
	InterpolationFunctoidMode3 see comments for abstract base class InterpolationFunctoid. More...
class	EMAN::InterpolationFunctoidMode4
	InterpolationFunctoidMode4 see comments for abstract base class InterpolationFunctoid. More...
class	EMAN::InterpolationFunctoidMode5
	InterpolationFunctoidMode5 Handles the special case of mode5 interpolation - see FourierInserter3DMode5. More...
class	EMAN::InterpolationFunctoidMode6
	InterpolationFunctoidMode6 see comments for abstract base class InterpolationFunctoid. More...
class	EMAN::InterpolationFunctoidMode7
	InterpolationFunctoidMode7 see comments for abstract base class InterpolationFunctoid. More...
class	EMAN::InterpolatedFRC
	Interpolated FRC - oversees calculation of the FRC and normalization values in Fourier Reconstruction (compares a slice (in some orientation) to a volume) This class works in a similar fashion to FourierPixelInserter3D objects in that the class is first initialized, all of the pixels are "inserted" iteratively, and finally a "finish" is called which calculates the quality scores and returns them in an approprate data object (QualityScores). More...
class	EMAN::InterpolatedFRC::QualityScores
	QualityScores class is used by the FourierReconstructor and InterpolatedFRC for storing useful quality information. More...
class	EMAN::InterpolatedFRCMode1
class	EMAN::InterpolatedFRCMode2
class	EMAN::InterpolatedFRCMode3
class	EMAN::InterpolatedFRCMode4
class	EMAN::InterpolatedFRCMode5
class	EMAN::InterpolatedFRCMode6
class	EMAN::InterpolatedFRCMode7
Defines
#define	eman_reconstructor_tools_h__   1
	Id reconstructor_tools.h,v 1.17 2009/02/12 00:36:08 woolford Exp

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Define Documentation

#define eman_reconstructor_tools_h__   1

Id

reconstructor_tools.h,v 1.17 2009/02/12 00:36:08 woolford Exp

Definition at line 37 of file reconstructor_tools.h.