[wiki:/Eman eman]

Image browser and tutorial interface

[wiki:/Boxer boxer]

Manual particle picking

[wiki:/CTFit ctfit]

CTF parameter determination and simulation

[wiki:/V4 v4]

Viewing 3-D models in projection

[wiki:/QSegment qsegment]

Interactive slice-by-slice 3D model segmentation

[wiki:/QIndex qindex]

2D crystal preprocessing and evaluation

[wiki:/HelixBoxer helixboxer]

Program for picking and evaluating non-square 'boxes'

[wiki:/Refine2D refine2d.py]

Make high-quality 2-D class-averages from stacks of raw particle images

[wiki:/Refine refine]

3-D model refinement

[wiki:/MultiRefine multirefine]

Simultaneous multiple model 3-D refinement

[wiki:/Proc2D proc2d]

Generic 2-D image processing

[wiki:/Proc3D proc3d]

Generic 3-D image processing

[wiki:/SpeedTest speedtest]

Simple application-specific computer benchmarking program