Results 76 - 100 of 109 results out of about 4272 pages. (3.64 seconds)
- EMAN2/Tutorials/RotateTranslate . . . 4 matches
- ... (image) objects. A very thorough explanation of using the Transform is presented in [[Eman2TransformInPython|Using the EMAN2 Transform class]] and you are encouraged to at least ...
- EMAN2/TransformConventions/Mirroring_Mirroring_in_the_Transform3D_object . . . 4 matches
- ...bf{0}^T,1]]$$}}}
=== Support for the mirroring operation in Transform3D ===
See * [[EMAN2/TransformConventions/Mirroring_Mirroring_in_the_Transform3D_object]]
=== Constructing...
- EMAN2/SimulatedData . . . 4 matches
- ...s. {{{e2help.py orientgen}}} for other possibilities
* if your input map possesses [[EMAN2/Symmetry|symmetry]], you can specify --sym <symmetry>, though this isn't very meaningf...
- EMAN2/Programs/e2workflow . . . 4 matches
- ...= e2workflow =
EMAN2 uses a project management Workflow system to guide users through a series of steps embodying specific tasks,
for example, single particle reconstruction. The...
- EMAN2/Programs/e2refinetorelion2d . . . 4 matches
- ...= e2refinetorelion2d =
=== Information ===
This program is normally run via the EMAN2 [[EMAN2/Programs/e2projectmanager|Project Manager]].
''e2refinetorelion2d.py'' is typicall...
- EMAN2/Programs/e2refinetofrealign/e2refinetofrealigntutorial . . . 4 matches
- ...Notes:
*The main documentation for ''e2refinetofrealign.py'' can be found [[EMAN2/Programs/e2refinetofrealign|here]]
*This tutorial is designed with an assumption in mind:
*T...
- EMAN2/Programs/e2make3d . . . 4 matches
- ...ogress
== e2make3d ==
||<35%><<TableOfContents>> ||
Add your related questions in [[EMAN2/e2make3dfaq|e2make3d FAQ]].
'''Description'''
This program reconstructs 3D volumes u...
- EMAN2/Programs/e2ctf . . . 4 matches
- ...= e2ctf =
||<<TableOfContents>> || {{attachment:ctf.png}} ||
== CTF Correction in EMAN2 ==
CTF correction in EMAN2 is performed on boxed out particles. There is a [[EMAN2/Theory/...
- EMAN2/Galleries . . . 4 matches
- ...= Gallery =
* [[EMAN2/Galleries/Testimages|Test images]]
* [[EMAN2/Programs/e2display|e2display features]]
* [[EMAN2/e2desktop_gallery|e2desktop]]
----
||{{attachment:newem3...
- Eman2Metadata . . . 3 matches
- ...This page has moved: [[EMAN2/Eman2Metadata]]...
- EMAN2/Tutorials/AddAndMultiply . . . 3 matches
- ...mages that have the same dimensions
{{{#!python
[someone@localhost] e2.py
Welcome to EMAN2
Prompt provided by IPython
Enter '?' for ipython help
In [3]: A = test_image(0)
In ...
- EMAN2/Programs/e2simmx2stage . . . 3 matches
- ...| [[#args|Command line arguments]] | [[#checkfunc|Check functionality]] | [[EMAN2/e2simmx2stagefaq|e2simmx2stage FAQ]] |
== e2simmx2stage ==
||<35%><<TableOfContents>> ||
This...
- EMAN2/Programs/e2project3d . . . 3 matches
- ...
== e2project3d.py ==
||<35%><<TableOfContents>>||
Add your related questions to [[EMAN2/e2project3dfaq|e2project3d FAQ]].
A desciption of how EMAN demarcates the asymmetric ...
- EMAN2/Programs/e2initialmodel . . . 3 matches
- ...odel is then used to seed a single particle refinement, very similar to that used in [[EMAN2/Programs/e2refine|e2refine.py]]. However, in this case, the input images
are just a fe...
- EMAN2/Obsolete . . . 3 matches
- ...== These pages relate to older versions of EMAN2 ==
* '''''Please read this [[EMAN2/DatabaseWarning|Important Warning]]''''' (pre 2.1)...
- EMAN2/Modular/Averagers . . . 3 matches
- ...''' or for more detailed information '''''e2help.py averager -v 2'''''.
Currently for EMAN2 refinements, these are the recommended choices:
* ctfw.auto - (recommended) CTF corr...
- EMAN2/Install/BinaryInstallAnaconda/2.9 . . . 3 matches
- ...ly, it contained instructions for v2.9, which is broken. Follow the instructions for v2.91, [[EMAN2/Install/BinaryInstallAnaconda/2.91|Binary Installation Instructions v2.91]].}}}...
- Eman2TransformInPython . . . 2 matches
- ...Page Moved: [[EMAN2/TransformInPython]]...
- Eman2PythonDoc . . . 2 matches
- ... be reliable!'''+~
<<TableOfContents>>
== examples ==
== libpyEM ==
=== qtgui ===
[[Eman2PythonDoc/emboxerbase|emboxerbase.py]]
=== wxgui ===
== programs ==
== pyemtbx ==
==...
- Eman2HDF . . . 2 matches
- ...= HDF5 =
This page has permanently moved to [[EMAN2/Hdf5Format]]...
- EMAN2/TransformInPython . . . 2 matches
- ...## page was renamed from Eman2TransformInPython
<<TableOfContents>>
= The center of the image =
----
The center of the image for purposes of rotations is different for odd and ev...
- EMAN2/Modular/Symmetries . . . 2 matches
- ...mmetries ==
To get a current list of Symmetries, run '''''e2help.py symmetry''''' or for more detailed information '''''e2help.py symmetry -v 2'''''.
See also [[EMAN2/Symmetry]]...
- EMAN2/Install/CondaInstall . . . 2 matches
- ...=== Conda Installation of eman-dev ===
1. [[EMAN2/Install/SourceInstall#Initial_Setup_.28one_time.29|Install Miniconda and mamba]].
1. Run
{{{#!highlight bash
mamba create -n...
- EMAN2/ClsResultFiles . . . 2 matches
- ... files ==
Produced by: '''e2classaverage.py'''
These files have the same format as [[EMAN2/ClassmxFiles|classify_xx]] files. They contain the final 2-D alignment information
for...
- EMAN2/boxerFAQ . . . 1 match
- NOTE that this is a wiki and if your question is not here then simply add it. An email will be sent to all people who are subscribed to this page letting them know that the page ha