Michael Bell, Ludtke Lab (2014 - 2019)

All are welcome to use the materials provided here. Credit is appreciated but not required.

Thesis

thesis.pdf, thesis.tex

Note: All protein illustrations in are licensed under a Creative Commons Attribution 4.0 International license by David S. Goodsell and the RCSB PDB.

Thesis Defense Presentation

defense_slides.key

Posters

cryoet_poster.pdf, cryoet_poster.pptx

scbmb_retreat_2016.pdf

biochem_retreat_2016.pdf

biophysical_society_2017.pdf

keck_arc_2017.pdf

sealy_2018.pdf

Note, these posters are have been uploaded without modification. There may be typos.

Talks

mapchallenge_wrapup_2017.key

microscopy_microanalysis_2018.ppt

Select Thesis Figures

Please see my thesis for corresponding figure captions.

Structural biology overview

struct_bio.png

Transmission electron microscopes (TEM)

tem.png

TEM grids

grid.png

Movie-mode imaging

movie.png

Basic image processing

imgproc.png

Fourier transforms

fft.png

Single particle analysis

spa.png

Contrast transfer function (CTF)

ctf.png

Gold Standard resolution measurement via Fourier Shell Correlation (FSC)

fsc.png

Electron cryo-tomography (cryoET)

cryoet.png

Subtomogram Averaging

subtomoavg.png