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eman2:library [2025/06/19 19:44] – steveludtke | eman2:library [2025/06/19 21:12] (current) – steveludtke |
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* [[Eman2:NumPy|Using NumPy with EMAN2]] | * [[Eman2:NumPy|Using NumPy with EMAN2]] |
* [[Eman2:JSStorage|EMAN2 JSON file access from Python]] | * [[Eman2:JSStorage|EMAN2 JSON file access from Python]] |
/* * [[Eman2:BdbStorage|EMAN2 BDB access from Python (obsolete)]] */ | |
* [[Eman2:Metadata|Parameters/Metadata appearing in EMData attributes (and stored on disk with the image), accessed with get_attr and set_attr]] | * [[Eman2:Metadata|Parameters/Metadata appearing in EMData attributes (and stored on disk with the image), accessed with get_attr and set_attr]] |
/* * [[Eman2:AppMetadata|Parameters/Metadata for applications, not associated with a specific image, stored in bdb:project]] */ | |
* [[EMAN2:EMAN1To2Translation|Limited Table of translations from EMAN1 functions -> EMAN2]] | * [[EMAN2:EMAN1To2Translation|Limited Table of translations from EMAN1 functions -> EMAN2]] |
* [[EMAN2:PMWorkflow|Modifying the EMAN2 projectmanager workflow]] | * [[EMAN2:PMWorkflow|Modifying the EMAN2 projectmanager workflow]] |
=== Intermediate Concepts === | === Intermediate Concepts === |
* [[Eman2:CProgQuickstart|EMAN2 C++ programming quickstart]] | * [[Eman2:CProgQuickstart|EMAN2 C++ programming quickstart]] |
* [[Eman2:ProgOverview|How to add new capabilities to EMAN2 in C++]] | |
* [[Eman2:UsingFTGL|Using FTGL in python/EMAN2]] | * [[Eman2:UsingFTGL|Using FTGL in python/EMAN2]] |
* [[Eman2:Using3DWidget|Using the EMScene3D widget (3-D object display)]] | * [[Eman2:Using3DWidget|Using the EMScene3D widget (3-D object display)]] |
* [[EMAN2:PMWorkflow|Tutorial for adding an e2program to projectmanager]] | * [[EMAN2:PMWorkflow|Tutorial for adding an e2program to projectmanager]] |
* [[Eman2:AddingWizard| Adding a Wizard to projectmanager]] | * [[Eman2:AddingWizard| Adding a Wizard to projectmanager]] |
* [[Eman2:ProgramingPM|Programming e2projectmanager.py]] | * [[Eman2:ProgrammingPM|Programming e2projectmanager.py]] |
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=== Advanced Topics === | === Advanced Topics === |
* There are a few classes like analyzers and reconstructors which are not methods of EMData | * There are a few classes like analyzers and reconstructors which are not methods of EMData |
* Many utility functions are static members of EMUtil | * Many utility functions are static members of EMUtil |
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| /* obsolete |
| * [[Eman2:BdbStorage|EMAN2 BDB access from Python (obsolete)]] |
| * [[Eman2:AppMetadata|Parameters/Metadata for applications, not associated with a specific image, stored in bdb:project]] |
| */ |
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{{attachment:sphere_cylinder_dist_grey_c.png}} | {{attachment:sphere_cylinder_dist_grey_c.png}} |
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