Our [[https://groups.google.com/forum/#!forum/eman2|Google Group]] is now the primary place for ongoing EMAN2 discussions. Note that the group has a searchable message archive. **General:** * [[EMAN2:FAQ/CiteEman2|What paper should I cite if I use EMAN2 for a reconstruction]] **Installation** * Installation FAQs can be found on the [[EMAN2:Install|Installation]] page. * [[EMAN2:FAQ/Computer|What sort of computer should I buy]] ? **BDB Issues ** (obsolete. BDB no longer used in EMAN2.1) * [[EMAN2:FAQ/NfsBdb|We use NFS-mounted directories, how can I safely use EMAN2 with it's BDB system]] * [[EMAN2:FAQ/BdbConvert|How can I convert these funny 'bdb' files into something I can use in Chimera or other software ?]] * [[EMAN2:FAQ/BdbErrors|I'm getting funny errors that seem to be related to BDB. What do I do ???]] * [[EMAN2:FAQ/BdbVstack|Can I make a vstack from another vstack, including only a subset of the images ? What will this do ?]] **Refinement Issues** * [[EMAN2:FAQ/Symmetry|What symmetry should I use for my particle if I don't know what it is ?]] * [[EMAN2:FAQ/AutoMask|How do I pick the correct parameters for automasking during refinement or using the mask.auto3d processor]] * [[EMAN2:FAQ/ChangeBoxSize|I just decided that my box size is too large, and I want to make it smaller, how can I do this without making a mess ?]] * [[EMAN2:FAQ/InvertData|I just realized that I forgot to invert my data. I see black protein on a white background. What do I do ?]] * [[EMAN2:FAQ/FSC|I computed my FSC curves and they look funny, what's going on, and how can I get them to look better]] **Program Specific FAQ** * [[EMAN2:boxerFAQ|e2boxer FAQ]] * [[EMAN2:e2make3dfaq|e2make3d FAQ]] **Programming FAQ** * [[EMAN2MakingVolumes|Is there a way to build a volume EMData object from a set of slices ?]] **EMAN2 and other software** * [[EMAN2:FAQ/SpiderEuler|Can I convert EMAN2 Euler angles from e2initialmodel.py to Spider (or other) convention ?]]