e2a2d_average

usage: Usage: e2a2d_average.py [options] 
	This program takes the results of e2a2d_align and produces averages of subsets of the aligned particles.

Option Type Description
--version None show program's version number and exit
--saveali None Save a stack file (aliptcls_XX.hdf) containing the aligned particles.
--path str Path to a folder with existing e2a2d_align results (default = 2da_XX)
--iter int Iteration number within path. Default = highest existing iteration
--scorebestset int Will extract the N particles with the best scores to make a new set
--scorebands int If specified will generate averages over N bands of 'score' values, including only particles in each band.
--scorebandsali int If specified will generate averages over N bands of 'score' values, including only particles in each band, and iteratively realigning in each band.
--scoreprogressive int If specified will generate progressive averages over N bands of 'score' values, including all particles starting with the best through the progressive bands.
--verbose, -v int verbose level [0-9], higher number means higher level of verboseness
--ppid int Set the PID of the parent process, used for cross platform PPID