e2motion
usage: prog [options]
WARNING: This program still under development.
This program is used to interactively generate sequences of class-averages from sets of particles. It can be
used for many purposes, but is primarily intended at studies of macromolecular dynamics and variability. A stack
of particles ostensibly in the same 3-D (but not 2-D) orientation are read in, then alignment, classification
and averaging is performed to produce pseudo time-series animations detailing some aspect of the structure's
variability.
To use this program, you must first run e2a2d_align to align a stack of particles to a single 2-D reference image.
This program will use those results as a starting point.
If an existing project is specified with --path, previous results will be re-opened
| Option |
Type |
Description |
| --version |
None |
show program's version number and exit |
| --threads |
int |
Number of alignment threads to run in parallel on a single computer. This is the only parallelism supported by e2spt_align at present. |
| --path |
str |
Path for the refinement, default=auto |
| --iter |
int |
Iteration number within path. Default = start a new iteration |
| --ppid |
int |
Set the PID of the parent process, used for cross platform PPID |