usage: Sub-frame alignment for single particle analysis. Need specific format for motion correction and refinement to work properly. The improvement in resolution seems marginal. Not ready to use yet.
| Option | Type | Description |
|---|---|---|
| --version | None | show program's version number and exit |
| --ptclin | str | particle input |
| --ptclout | str | particle output |
| --ref | str | reference input |
| --parallel | str | Thread/mpi parallelism to use. Default is thread:12 |
| --debug | None | Turn on debug mode. This will only process a small subset of the data |
| --maxres | float | max resolution for cmp |
| --minrespx | int | skip the first x pixel in fourier space |
| --ppid | int | ppid... |
| --verbose, -v | int | Verbose |