e2spt_project

usage: Usage: e2spt_average.py [options] 
Note that this program is not part of the original e2spt hierarchy, but is part of an experimental refactoring.

Will read metadata from the specified spt_XX directory, as produced by e2spt_align.py, and generate projections of the selected subset of particles after
alignment to the reference, projected along the Z axis.

Option	Type	Description
--version	None	show program's version number and exit
--threads	int	Number of alignment threads to run in parallel on a single computer. This is the only parallelism supported by e2spt_align at present.
--iter	int	Iteration number within path. Default = start a new iteration
--simthr	float	Similarity is smaller for better 'quality' particles. Specify the highest value to include from e2spt_hist.py. Default -0.1
--replace	str	Replace the input subtomograms used for alignment with the specified file (used when the aligned particles were masked or filtered)
--minalt	float	Minimum alignment altitude to include. Default=0
--maxalt	float	Maximum alignment altitude to include. Deafult=180
--symalimasked	str	This will translationally realign each asymmetric unit to the specified (usually masked) reference
--sym	str	Symmetry of the input. Must be aligned in standard orientation to work properly.
--path	str	Path to a folder containing current results (default = highest spt_XX)
--verbose, -v	int	verbose level [0-9], higher number means higher level of verboseness
--ppid	int	Set the PID of the parent process, used for cross platform PPID