e2spt_tomoctf

usage: prog  <tilt series 1> <tilt seires 2> ... [options]
	CTF estimation for tilt series. The tomogram reconstruction needs to be done with e2tomogram.py. This will only estimate CTF parameters and write the information in the corresponding info files. Actual per particle CTF correction will be done at the particle extraction step.

Option	Type	Description
--version	None	show program's version number and exit
--alltiltseries	None	Use all tilt series in the folder. Acceptable file extensions include hdf, mrc, mrcs, st.
--dfrange	str	Search range of defocus (start, end, step). default is 2., 7, 0.02
--psrange	str	phase shift range (start, end, step). default is 10, 15, 5
--tilesize	int	Size of tile to calculate FFT, default is 256
--voltage	int	Voltage of microscope in kV
--cs	float	Cs of microscope
--nref	int	Using N tilt images near the center tilt to estimate the range of defocus for all images. Default is 15
--stepx	int	Number of tiles to generate on x-axis (different defocus)
--stepy	int	Number of tiles to generate on y-axis (same defocus)
--checkhand	None	Check the handedness of tomogram.
--threads	int	Number of threads to run in parallel on the local computer
--nolog	None	Default=False. Turn off recording of the command ran for this program onto the .eman2log.txt file
--verbose, -v	int	verbose level [0-9], higher number means higher level of verboseness
--writetmp	None	Write temporary files. For --checkhand only.
--bgcurve	str	load a curve of background power spectrum to substract for ctf estimation.
--ppid	int	Set the PID of the parent process, used for cross platform PPID