Option Type Description
--version None show program's version number and exit
--ali3dold str
--ali3dnew str
--path str
--ali2d str
--nframe int number of frames in the trajectory
--maxshift float ignore particles with drift/rotation (pixel/degree) larger than this. default 7
--nstd float build trajectories from -n x std to n x std of eigenvalues. default is 2
--nptcl int number of particle per average. default is 500
--threads int threads