usage: prog [options] <ssehunter_file> <sec_struct_file> WARNING: This program is experimental and still under development. Contact mbaker@bcm.edu for more information. ssehunter file is in ??? format sec_struct_file is a string of -,H,E defining per-residue predicted structure
| Option | Type | Description |
|---|---|---|
| --version | None | show program's version number and exit |
| --maxbad, -M | int | Maximumum number of unassigned helices |
| --minhelix, -H | int | Minimum residues in a helix |
| --maxpairerr, -E | float | Maximum error match between pairs of helices, default=50 |
| --skelpath, -K | str | Optional (recommended) output from the e2skelpath.py program |
| --ppid | int | Set the PID of the parent process, used for cross platform PPID |
| --verbose, -v | int | verbose level [0-9], higher number means higher level of verboseness |