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 1. Download and install [[https://www.continuum.io/downloads | Anaconda2]]/[[https://conda.io/miniconda.html | Miniconda2]].  1. Download and install [[https://www.continuum.io/downloads | Anaconda2]] or [[https://conda.io/miniconda.html | Miniconda2]].
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 1. Optionally, activate an existing conda environment, e.g. `source activate eman-env`.
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conda install eman-dependencies -c cryoem -c defaults -c conda-forge export MACOSX_DEPLOYMENT_TARGET=10.7 # Yosemite, El Capitan
conda install eman-deps -c cryoem -c defaults -c conda-forge
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 1. Optionally, activate an existing conda environment, e.g. `source activate eman-env`.

!!! UNDER CONSTRUCTION !!!

All platforms

The following instructions will work with cmake changes introduced in https://github.com/cryoem/eman2/pull/65.

Mac OS X, Linux

  1. Download and install Anaconda2 or Miniconda2.

  2. Checkout EMAN2 code from GitHub:cryoem/eman2. 

    cd <some-path-to-keep-eman2-source>
git clone https://github.com/cryoem/eman2.git

  3. Optionally, activate an existing conda environment, e.g. source activate eman-env.

  4. Install dependencies 

    export MACOSX_DEPLOYMENT_TARGET=10.7  # Yosemite, El Capitan
conda install eman-deps -c cryoem -c defaults -c conda-forge

  5. Out-of-source builds are recommended, so work in a directory outside of eman2 source. Note cmake, not ccmake . 

    cd <build-directory>
cmake <some-path-to-keep-eman2-source>
make -j
make install

Windows

EMAN2/COMPILE_EMAN2_ANACONDA-PRE-CONDA-ENVIRONMENTS (last edited 2019-11-01 14:27:54 by TunayDurmaz)