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EMAN2 use [http://www.boost.org/libs/python/doc/ Boost.python] to wrap c++ function to Python. [http://www.boost.org/libs/python/pyste/ Pyste] is a Boost.Python code generator to automate this process. In EMAN2 there is a script create_boost_python in /eman2/libpyEM directory calls [http://www.boost.org/libs/python/pyste/ Pyste] to create c++ wrapping files libpy***.cpp. Then the c++ compiler will create libraries which contain all the Python function call of EMAN2. Current release of [http://www.boost.org/libs/python/pyste/ Pyste] has a dificit for the default argument handling. So please replace two of your Pyste files in Python site-packages with attached files. === Documentation for Python or C++ Programmers ===
 * [:EMAN2DevFAQ:EMAN2 developer's FAQ]
 * [:Eman2ProgQuickstart:EMAN2 programming quickstart]
 * [:Eman2DataStorage:EMAN2 data storage, format conversion and local database]
 * [:Eman2UsingFTGL:Using FTGL in python in EMAN2]
 * [:EMAN1To2Translation:Limited Table of translations from EMAN1 functions -> EMAN2]
 * [http://blake.bcm.edu/eman2/doxygen_html/ Autogenerated Python/C++ Documentation (Doxygen)]
  * There are a LOT of classes in the automatic docs. Basic images are represented by the EMData class
  * The EMData methods process, cmp, align, and project are modular methods with many available functions. Use dump_processors(), dump_cmps(), etc.
  * There are a few classes like analyzers and reconstructors which are not methods of EMData
  * Many utility functions are static members of EMUtil

Documentation for Python or C++ Programmers

  • [:EMAN2DevFAQ:EMAN2 developer's FAQ]
  • [:Eman2ProgQuickstart:EMAN2 programming quickstart]

  • [:Eman2DataStorage:EMAN2 data storage, format conversion and local database]

  • [:Eman2UsingFTGL:Using FTGL in python in EMAN2]
  • [:EMAN1To2Translation:Limited Table of translations from EMAN1 functions -> EMAN2]

  • [http://blake.bcm.edu/eman2/doxygen_html/ Autogenerated Python/C++ Documentation (Doxygen)]

    • There are a LOT of classes in the automatic docs. Basic images are represented by the EMData class
    • The EMData methods process, cmp, align, and project are modular methods with many available functions. Use dump_processors(), dump_cmps(), etc.
    • There are a few classes like analyzers and reconstructors which are not methods of EMData
    • Many utility functions are static members of EMUtil

EMAN2/Library (last edited 2023-01-02 19:26:26 by TunayDurmaz)