Differences between revisions 2 and 5 (spanning 3 versions)

e2helixboxer.py: Overview

e2helixboxer.py is used to select rectangular 2D projections of helices from a micrograph, and extract overlapping particles from the boxed helices.

GUI mode

To start the program's graphic user interface, use the "--gui" option. You can follow this with a micrograph filename, a list of micrograph filenames, or nothing.

$ e2helixboxer.py --gui <micrograph1> <micrograph2> <...>

$ e2helixboxer.py --gui
$ e2helixboxer.py --gui 101.mrc
$ e2helixboxer.py --gui *.mrc micrograph.hdf *.img abc.dm3

-  ⇤ ← Revision 2 as of 2010-07-22 21:24:28 → 
  Size: 182
  Editor: RossColeman
  Comment:
+   ← Revision 5 as of 2010-07-22 21:42:38 → ⇥
  Size: 622
  Editor: RossColeman
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
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-e2helixboxer.py is used to select rectangular 2D projections of helices from a micrograph, and extract overlapping particles from the boxed helices. {{attachment:e2helixboxer.png}}
+= e2helixboxer.py: Overview =
e2helixboxer.py is used to select rectangular 2D projections of helices from a micrograph, and extract overlapping particles from the boxed helices.

== GUI mode ==
To start the program's graphic user interface, use the "--gui" option. You can follow this with a micrograph filename, a list of micrograph filenames, or nothing.

{{{
$ e2helixboxer.py --gui <micrograph1> <micrograph2> <...>
}}}
{{{
$ e2helixboxer.py --gui
$ e2helixboxer.py --gui 101.mrc
$ e2helixboxer.py --gui *.mrc micrograph.hdf *.img abc.dm3
}}}
{{attachment:e2helixboxer.png}}

== Command-line mode ==