This program will take the results of a frealign refinement run via e2runfrealign.py and convert the output files into formats that allow comparison between eman2 and FreAlign output maps. It will also calculate an fsc curve between the output FreAlign map and the eman2 map as well as convert the FreAlign internal fsc curve into an eman2 compatible format. It will create a text file called diff.txt that contains the per particle differences between the FreAlign output parameters for each particle and the eman2 input parameters for each particle. This file also contains averages and summaries for the per particle differences. To view the FSC curves, click on the "Resolution" task in the e2workflow and double click on the corresponding frealign_xx directory in the list.




show program's version number and exit




show this help message and exit

EMAN2/Programs/e2refinefromfrealign (last edited 2011-03-28 19:58:01 by StephenMurray)