Differences between revisions 9 and 12 (spanning 3 versions)
Revision 9 as of 2013-01-23 19:50:32
Size: 989
Comment:
Revision 12 as of 2013-01-23 19:52:57
Size: 1000
Comment:
Deletions are marked like this. Additions are marked like this.
Line 17: Line 17:
{{attachment:Basic Project Manager Window.png|width=200 height=300}} {{attachment:Basic Project Manager Window.png|EMAN2 Project Manager|width=400}}

The main documentation for e2refinetorelion3d.py can be found here


e2refinetorelion3d Tutorial

Basic Information

This tutorial is designed with 2 assumptions in mind:

  • That the user has installed Relion on their local machine. Though we do not run the relion_refine program on a local machine, several scripts from the Relion installation package are used to prepare the EMAN2 data for a Relion run. Relion can be downloaded here

  • That the user has fully completed an EMAN2 refinement. This program draws from many files in the EMAN2 directory structure and was designed to rely on these files existing.

Tutorial

The first thing to do, assuming you've installed Relion and run an EMAN2 reconstruction is to open up the project manager:

e2projectmanager.py

EMAN2 Project Manager

EMAN2/Programs/e2refinetorelion3d/e2refinetorelion3dtutorial (last edited 2014-05-28 18:44:44 by StephenMurray)