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e2refinetorelion3d Tutorial

Basic Information

This tutorial is designed with 2 assumptions in mind:


The first thing to do, assuming you've installed Relion and run an EMAN2 reconstruction is to open up the Project Manager:

EMAN2 Project Manager

Once you open up the project manager, select the plus (+) next to the 3D refinement tab and you will see several new options appear. The option we want to select is the "Relion 3D Refinement" option.


This opens up three tabs in the viewing window: GUI, Command, and Help. 'GUI' contains the options for, 'Command' is the command that will be executed when the user launches the program, and 'Help' is the help text associated with In the 'GUI' window, there are several sections of options. The first set options you will see are the I/O options.

I/O Options