e2seq2pdb.py

e2seq2pdb.py is a key component of Pathwalker, described in the following publication:

Baker, M.R., Rees, I., Ludtke, S.J., Chiu, W., Baker, M.L., 2012. Constructing and validating initial cα models from subnanometer resolution density maps with pathwalking. Structure 20, 450-463.

Using e2seq2pdb.py

muta:~ irees$ python ./e2seq2pdb.py --help
Usage: e2seq2pdb.py [options] <PDBmodel> <sequence> <outputPDB> 
        
        Builds all possible chain traces
        

Options:
  --version   show program's version number and exit
  -h, --help  show this help message and exit

-  ⇤ ← Revision 2 as of 2012-03-22 19:02:35 → 
  Size: 428
  Editor: IanRees
  Comment:
+   ← Revision 3 as of 2012-03-27 05:50:13 → ⇥
  Size: 687
  Editor: IanRees
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
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-Coming soon..
+{{{
muta:~ irees$ python ./e2seq2pdb.py --help
Usage: e2seq2pdb.py [options] <PDBmodel> <sequence> <outputPDB> 
 
 Builds all possible chain traces
 

Options:
  --version   show program's version number and exit
  -h, --help  show this help message and exit
}}}