Tomogram Segmentation

Availability: EMAN2 daily build after 2016-10

Programs in the tomogram segmentation requires Theano, which is not distributed with EMAN2. To use the protocol, one needs to build EMAN2 from source and install Theano manually.

http://deeplearning.net/software/theano/install.html

Import Tomograms

Select Positive Samples

Manually Annotate Samples

Select Negative Samples

Build Training Set

Train Neural Network

Apply to Tomograms