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| These are short (<15 min each) video demos of various aspects of the EMAN2 system. They are also available on [[http://www.youtube.com|YouTube]], search for sludtke42. | We are now hosting periodic live video-conferences/telecasts to discuss specific EMAN2 topics, in addition to some short tutorial videos. These telecasts are available live, and are recorded for later viewing on YouTube as well as directly on this site. |
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| Note also that these are in Quicktime format. If you want to watch them fullscreen, you will need to download them to your machine, then play the local copy. If you watch in the browser the display size will be restricted. ''This is still a work in progress. Only a portion of these planned videos have been completed'' |
These tutorials are also generally available through [[http://www.youtube.com/user/sludtke42|my YouTube channel]], but if you are in a location where YouTube isn't accessible, you can use the links below instead. |
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| .1.0 [[http://blake.bcm.edu/dl/EMAN2/1.0.EMAN2_GUI_Intro_480.mov|Introduction to EMAN2 GUI (Graphical User Interface)]] .1.1 [[http://blake.bcm.edu/dl/EMAN2/1.1.intro_final.mov|Overview of the EMAN2 system]] .1.2 Installing EMAN2 |
* [[http://blake.bcm.edu/dl/EMAN2/1.0.EMAN2_GUI_Intro_480.mov|Introduction to EMAN2 GUI (Graphical User Interface)]] * [[http://blake.bcm.edu/dl/EMAN2/1.1.intro_final.mov|Overview of the EMAN2 system]] * One hour to subnanometer resolution - a quick runthrough of single particle refinement in EMAN2.1 [[http://youtu.be/bUh9vJsq2ZE|YouTube]] or [[http://blake.bcm.edu/dl/EMAN2/air_1.mp4|Direct]] |
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| == Users == .2 Overview for Users .2.1 Introduction to Command-line programs .2.2 Workflow Interface .2.2.1 Single Particle Reconstruction .2.2.1.1 Starting a Project .2.2.1.2 Picking Particles .2.2.1.3 CTF Correction .2.2.1.4 Building Sets .2.2.1.5 2-D Reference Free Class Averages .2.2.1.6 Making an Initial Model .2.2.1.7 Running a Refinement .2.2.1.8 Evaluating your Results .2.2.2 Single Particle Tomography .2.2.2.1 Introduction .2.3 Using EMAN2 from the Python Prompt .2.3.1 [[http://blake.bcm.edu/dl/EMAN2/2.3.1.eman2_interactive_fft.mov|Interactive Teaching with EMAN2 (real-time FFT demo)]] (Note: doesn't teach FFT's, but rather teaches HOW to teach FFTs using EMAN2) === Programmers === .3. [[http://blake.bcm.edu/dl/EMAN2/3.0.IntroEMAN2Prog.mov|Introduction to EMAN2 programming in Python]] |
== Programmers == *[[http://blake.bcm.edu/dl/EMAN2/3.0.IntroEMAN2Prog.mov|Introduction to EMAN2 programming in Python]] * [[http://blake.bcm.edu/dl/EMAN2/2.3.1.eman2_interactive_fft.mov|Interactive Teaching with EMAN2 (real-time FFT demo)]] (Note: doesn't teach FFT's, but rather teaches HOW to teach FFTs using EMAN2) |
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| == Longer presentations from workshops == | == Longer (largely out of date) presentations from workshops == |
Video Tutorials for EMAN2
We are now hosting periodic live video-conferences/telecasts to discuss specific EMAN2 topics, in addition to some short tutorial videos. These telecasts are available live, and are recorded for later viewing on YouTube as well as directly on this site.
These tutorials are also generally available through my YouTube channel, but if you are in a location where YouTube isn't accessible, you can use the links below instead.
Introduction
One hour to subnanometer resolution - a quick runthrough of single particle refinement in EMAN2.1 YouTube or Direct
Programmers
Interactive Teaching with EMAN2 (real-time FFT demo) (Note: doesn't teach FFT's, but rather teaches HOW to teach FFTs using EMAN2)