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| These are short (<10 min each) video demos of various aspects of the EMAN2 system. They are also available on [[http://www.youtube.com|YouTube]]. | We are now hosting periodic live video-conferences/telecasts to discuss specific EMAN2 topics, in addition to some short tutorial videos. These telecasts are available live, and are recorded for later viewing on YouTube as well as directly on this site. |
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| Note that these are a work in progress, those that aren't clickable as links do not yet exists. | These tutorials are also generally available through [[http://www.youtube.com/user/sludtke42|my YouTube channel]], but if you are in a location where YouTube isn't accessible (China), many of these videos are also available from [[VideoTutorialsLocal]]. |
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| == Introduction == 1. [[http://blake.bcm.edu/dl/eman2/1.1.intro_final.mov|Overview of the EMAN2 system]] 1. Introduction to EMAN2 GUI (Graphical User Interface) 1. Installing EMAN2 |
== Using EMAN2.1 == * [[http://youtu.be/bUh9vJsq2ZE|One hour to subnanometer resolution - a quick runthrough of single particle refinement in EMAN2.1]] |
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| * [[http://blake.grid.bcm.edu/dl/scandem_intro.mov|EMAN2 introduction from SCANDEM 2010 (30 min)]] | == For Programmers == *[[http://youtu.be/eklwhwxKe7o|Introduction to EMAN2 programming in Python]] *[[http://youtu.be/HxFGHbGPJzI|Interactive Teaching with EMAN2 (real-time FFT demo)]] (Note: doesn't teach FFT's, but rather teaches HOW to teach FFTs using EMAN2) |
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| == Users == 1. Introduction to Command-line programs 1. Workflow Interface 1. Single Particle Reconstruction 1. Starting a Project 1. Picking Particles 1. CTF Correction 1. Building Sets 1. 2-D Reference Free Class Averages 1. Making an Initial Model 1. Running a Refinement 1. Evaluating your Results 1. Single Particle Tomography 1. Introduction |
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| * [[http://blake.grid.bcm.edu/dl/scandem_tutorial1.mov|First part of an EMAN2 demonstration session from SCANDEM 2010 (~2 hr)]] * [[http://blake.grid.bcm.edu/dl/scandem_tutorial2.mov|Second part of an EMAN2 demonstration session from SCANDEM 2010 (~2 hr)]] === Programmers === 1. Introduction to EMAN2 Programming 1. Python 1. Overview of Classes 1. C++ 1. Establishing a build environment |
== Somewhat obsolete presentations for EMAN2.0 == * [[http://blake.bcm.edu/dl/EMAN2/1.0.EMAN2_GUI_Intro_480.mov|Introduction to EMAN2 GUI (Graphical User Interface)]] * [[http://blake.bcm.edu/dl/EMAN2/1.1.intro_final.mov|Overview of the EMAN2 system]] * [[http://blake.grid.bcm.edu/dl/EMAN2/scandem_intro.mov|EMAN2 introduction from SCANDEM 2010 (30 min)]] * [[http://blake.grid.bcm.edu/dl/EMAN2/scandem_tutorial1.mov|First part of an EMAN2 demonstration session from SCANDEM 2010 (~2 hr)]] * [[http://blake.grid.bcm.edu/dl/EMAN2/scandem_tutorial2.mov|Second part of an EMAN2 demonstration session from SCANDEM 2010 (~2 hr)]] |
Video Tutorials for EMAN2
We are now hosting periodic live video-conferences/telecasts to discuss specific EMAN2 topics, in addition to some short tutorial videos. These telecasts are available live, and are recorded for later viewing on YouTube as well as directly on this site.
These tutorials are also generally available through my YouTube channel, but if you are in a location where YouTube isn't accessible (China), many of these videos are also available from VideoTutorialsLocal.
Using EMAN2.1
For Programmers
Interactive Teaching with EMAN2 (real-time FFT demo) (Note: doesn't teach FFT's, but rather teaches HOW to teach FFTs using EMAN2)