Results 51 - 75 of 109 results out of about 4264 pages. (3.66 seconds)
- EMAN2_COMPILATION . . . 9 matches
- ... * [[http://blake.bcm.tmc.edu/eman/eman2/INSTALL|EMAN2's INSTALL page]]
* [[COMPILE_EMAN2_WINDOWS|Compile EMAN2 with Visual Studio .Net 2003 on Windows XP]]
* [[COMPILE_EMAN2_MA...
- EMAN2/Programs/emimage3d . . . 9 matches
- ...| [[e2display|Display Basics]] | [[EMAN2/Programs/emselector|EMAN2 File Browser]] | [[EMAN2/Programs/emimage2d|2D Display]] | [[EMAN2/Programs/emimagemx|2D Stack Display]] | [[EM...
- EMAN2/Programs/emimage2d . . . 9 matches
- ...| [[e2display|Display Basics]] | [[EMAN2/Programs/emselector|EMAN2 File Browser]] | [[EMAN2/Programs/emimage2d|2D Display]] | [[EMAN2/Programs/emimagemx|2D Stack Display]] | [[EM...
- EMAN2/Programs/e2eulerxplor . . . 9 matches
- ...| [[e2display|Display Basics]] | [[EMAN2/Programs/emselector|EMAN2 File Browser]] | [[EMAN2/Programs/emimage2d|2D Display]] | [[EMAN2/Programs/emimagemx|2D Stack Display]] | [[EM...
- EMAN2/DirectoryStructure . . . 9 matches
- ...== Folder Arrangement in EMAN2.2 projects ==
=== Detailed description of files ===
You will find a detailed description of the contents of many files produced by refinements and ...
- EMAN2PMWorkflow . . . 8 matches
- ...
{{{#!highlight python
#!/usr/bin/env python
#
# GPL licensing info goes here
#
from EMAN2 import *
def main():
progname = os.path.basename(sys.argv[0])
usage = """prog...
- EMAN2/e2displayfag . . . 8 matches
- ...| [[e2display|Display Basics]] | [[EMAN2/Programs/emselector|EMAN2 File Browser]] | [[EMAN2/Programs/emimage2d|2D Display]] | [[EMAN2/Programs/emimagemx|2D Stack Display]] | [[EM...
- EMAN2/FAQ/SpiderEuler . . . 8 matches
- ...r) convention ?'''
'''A:'''
Similar to supporting the various available file-formats, EMAN2 also supports most of the available Euler angle conventions
(see [[Eman2TransformInPyt...
- EMAN2/FAQ/NfsBdb . . . 8 matches
- ...= Using BDB with NFS mounted filesystems =
You should, of course, read this [[EMAN2/DatabaseWarning|database warning]] as a first step.
== Quick advice ==
* Never EVER run EMAN...
- EMAN2/Eman1Transition/Python . . . 8 matches
- ...= EMAN2 scripting for EMAN1 users =
The EMAN2 python library has many similarities to EMAN1. The main image data class is even called EMData, just like EMAN1. The most significan...
- Eman2InfoMetadata . . . 7 matches
- ... opened in any text-editor.
For more information on these files and accessing them in EMAN2, see [[Eman2JSStorage]].
While these files are human-readable, using the "Info" butto...
- EMAN2/Tutorials/make_a_projection . . . 7 matches
- ... and you must be able to define your projection direction as a Transform object. See [[Eman2TransformInPython|Using the EMAN2 Transform class]] and the Transform [[EMAN2/Tutorials...
- EMAN2/Programs/e2refinetofrealign . . . 7 matches
- ...e2refinetofrealign =
=== Information ===
Note - this program is normally run via the EMAN2 [[EMAN2/Programs/e2projectmanager|Project Manager]].
This program will take various f...
- EMAN2/Programs/e2display . . . 7 matches
- ...|[[EMAN2/Programs/emselector|EMAN2 File Browser]] | [[EMAN2/Programs/emimage2d|2D Display]] | [[EMAN2/Programs/emimagemx|2D Stack Display]] | [[EMAN2/Programs/emimage3d|3D Image ...
- EMAN2/Programs/e2classaverage3d . . . 7 matches
- ...= e2classaverage3d =
This program is the 3-D analog of [[EMAN2/Programs/e2classaverage|e2classaverage]]. It will iteratively align and average stacks
of 3D particles.
For a more...
- Eman2ImageMetadata . . . 6 matches
- ...== Metadata in EMAN2 ==
Most metadata in EMAN2 is stored either in JSON files (human readable & editable structured text files) or in the headers of the images themselves. These ...
- EMAN2/e2gmm . . . 6 matches
- ...ns'''
* '''THE e2gmm program is under active development. STRONGLY encourage using an EMAN2 snapshot or source version dated 12/2022 or later. Even with a current version you may...
- EMAN2/Programs/e2refinetorelion3d . . . 6 matches
- ...= e2refinetorelion3d =
=== Information ===
This program is normally run via the EMAN2 [[EMAN2/Programs/e2projectmanager|Project Manager]].
''e2refinetorelion3d.py'' is run afte...
- EMAN2/Programs/e2bdb . . . 6 matches
- ...= e2bdb.py =
This is the main command-line program for manipulating EMAN2 BDB database files. Please read more about the
[[Eman2DataStorage|BDB database]] itself.
||-c||--clean...
- EMAN2/Parallel/Threaded . . . 6 matches
- ...=== Threaded Parallelism in EMAN2 ===
Most modern computers have at a minimum 2 'cores'. A decade ago this would have been called 2 CPUs, however, now you may still have 2 physic...
- Eman2PythonDoc/emboxerbase . . . 5 matches
- ...[[Eman2PythonDoc|EMAN2 Python Documentation Home]]
= emboxerbase.py =
~+'''__Note: This documentation is in its very early stages and may not be reliable!__'''+~
<<TableOfCont...
- EMAN2/TomoSymmetry . . . 5 matches
- ...zing/classifying not entire symmetric particles, but on an individual subunit basis.
EMAN2 has 2 primary methods to permit this in the new subtomogram averaging pipeline (using ...
- EMAN2/Programs/e2boxer . . . 5 matches
- ...ted]] | [[#tipsandtricks|Tips And Tricks]] | [[#generalinfo|General Information]] | [[EMAN2/boxerFAQ|e2boxer FAQ]] |[[EMAN2/boxerdevelopment|Development page]] |
= e2boxer =
||...
- EMAN2/Modular/Overview . . . 5 matches
- ...== Overview of modular functions in EMAN2 ==
EMAN2's modular function interface is one of its most powerful features, permitting a wide range of different algorithms
to be select...
- eman2Assertion . . . 4 matches
- ...'''How to use assertion in EMAN2?'''
EMAN2 has wrapped standard assert call as Assert. The header file is "emassert.h" instead of standard <cassert> or <assert.h>. The assert cal...