Results 1 - 25 of 102 results out of about 4005 pages. (1.72 seconds)

EMAN2/Programs/new_docs . . . 148 matches
... 1. [[EMAN2/Programs/new_docs/e2RCTboxer | e2RCTboxer.py]] 1. [[EMAN2/Programs/new_docs/e2a2d_align | e2a2d_align.py]] 1. [[EMAN2/Programs/new_docs/e2a2d_average | e2a2d_average...

9.1k - rev: 1 (current) last modified: 2018-04-25 01:01:08

EMAN2/COMPILE_EMAN2_ANACONDA . . . 37 matches
... {{{#!html <h1 style="margin-bottom:5px;"> Building EMAN2/SPARX/SPHIRE from Source </h1> <p style="font-size:110%; text-align:center; margin-top:5px; margin-left:20px; margin-r...

12.1k - rev: 112 (current) last modified: 2021-03-30 18:06:16

EMAN2/COMPILE_EMAN2_ANACONDA/2.31 . . . 36 matches
...d Build, All Platforms = These instructions are for building with '''!NumPy v1.13'''. EMAN2 source lives on !GitHub, downloading the source is part of the instructions below. Sin...

6.9k - rev: 11 (current) last modified: 2019-11-22 10:24:12

EMAN2/COMPILE_EMAN2_ANACONDA-PRE-CONDA-ENVIRONMENTS . . . 34 matches
...d Build, All Platforms = These instructions are for building with '''!NumPy v1.13'''. EMAN2 source lives on !GitHub, downloading the source is part of the instructions below. Sin...

6.5k - rev: 91 (current) last modified: 2019-11-01 14:27:54

EMAN2/Tutorials . . . 57 matches
...= EMAN2 Introductory Tutorials = ''Please note that we are continuously developing and updating the tutorials. Most tutorials include the necessary data. If you have a request fo...

6.9k - rev: 164 (current) last modified: 2021-02-26 21:26:22

EMAN2/Install . . . 54 matches
...= Installing EMAN2 / SPHIRE = === Binary Installation (most users should do this) === [[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_versions|Download EMAN2 / SPHIRE bin...

2.2k - rev: 67 (current) last modified: 2021-02-27 18:40:34

EMAN2 . . . 54 matches
...= EMAN2.9 = Most of the pages are editable by any user that has registered an account on the server. To prevent spam, you need to email sludtke@bcm.edu to get an account on the sy...

6.6k - rev: 178 (current) last modified: 2021-02-24 23:11:27

EMAN2/Programs . . . 51 matches
...== EMAN2 Programs == '''This page is very incomplete, but running any EMAN2 program with the '--help' option will provide documentation for that program.''' == Generic Docs == ...

5.6k - rev: 65 (current) last modified: 2018-04-25 00:59:47

Eman2AppMetadata . . . 50 matches
...bsolete = == Global dictionaries/parameters == === 00image_counts database === Every EMAN2DB directory will contain an image count cache database which will contain a number of ...

23.9k - rev: 113 (current) last modified: 2013-08-11 18:07:28

EMAN2/Eman1Transition/Eman1v2 . . . 44 matches
...= An overview of changes between EMAN1 and EMAN2 = We have tried to preserve as many of the conventions from EMAN1 as possible, to limit the difficulty in making the transition. ...

12.7k - rev: 17 (current) last modified: 2014-04-11 12:54:55

EMAN2/Library . . . 38 matches
...= Documentation for Python or C++ Programmers === ==== Introductory concepts ==== * [[EMAN2PythonStyleGuide|EMAN2 Python Programming Style Guide]] * [[Eman2ProgQuickstart|EMAN2 ...

2.5k - rev: 48 (current) last modified: 2015-03-14 05:33:10

EMAN2/Install/BinaryInstallAnaconda/2.9 . . . 36 matches
...<TableOfContents()>> = Download = * [[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_version/31|Download EMAN2.9]]. * [[http://cryoem.bcm.edu/cryoem/downloads/view_eman2...

11.9k - rev: 41 (current) last modified: 2021-02-13 20:57:19

EMAN2/DatabaseWarning . . . 35 matches
...NOTE: This page really only applies to EMAN2.0x. If you are using EMAN2.1+, you should no longer have any of these issues, since BDB has been deprecated in favor of HDF and JSON f...

9.5k - rev: 30 (current) last modified: 2014-04-22 14:49:36

EMAN2/Install/BinaryInstallAnaconda . . . 34 matches
...<TableOfContents()>> = Download = * [[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_version/25|Continuous Build]]. * [[http://cryoem.bcm.edu/cryoem/downloads/view_eman2...

11.9k - rev: 62 (current) last modified: 2021-02-27 19:29:34

EMAN2/Programs/e2refine . . . 32 matches
...== e2refine == This program is the heart of single particle reconstruction in EMAN2. It embodies the concept of an iterative 3-D single particle reconstruction in a single step, ...

14.0k - rev: 10 (current) last modified: 2012-09-21 11:59:03

EMAN2/Concepts . . . 30 matches
...= EMAN2 Concepts and Conventions = === Box Size (Important) === * Particle [[EMAN2/BoxSize|box-size]] - Impacts quality and speed of reconstructions! === Data Storage === * Su...

2.5k - rev: 48 (current) last modified: 2019-07-19 15:35:37

EMAN2/Important . . . 28 matches
...= Important Information = == For Everyone == * '''Working with Images''' - EMAN2 has '''many''' [[EMAN2/Modular/Overview|general image processing methods]], and the list is cont...

2.9k - rev: 7 (current) last modified: 2019-09-30 12:50:07

EMAN2/FAQ . . . 25 matches
...Our [[https://groups.google.com/forum/#!forum/eman2|Google Group]] is now the primary place for ongoing EMAN2 discussions. '''General:''' * [[EMAN2/FAQ/CiteEman2|What paper sho...

1.9k - rev: 48 (current) last modified: 2016-11-03 19:18:04

Eman2DataStorage . . . 24 matches
...== Image Data files in EMAN2 == Virtually all cryo-EM file formats are supported as well as some good generic formats. The default format used in EMAN2 processing is HDF5, which ...

10.6k - rev: 64 (current) last modified: 2013-08-27 04:07:07

EMAN2/Programs/e2refinemulti . . . 24 matches
...== e2refinemulti == This is a variant of the standard [[EMAN2/Programs/e2refine|e2refine]] program. This version performs so-called multi-model refinement. Rather than producing ...

12.0k - rev: 2 (current) last modified: 2011-12-01 05:24:06

EMAN2/VideoTutorials . . . 22 matches
...== Video Tutorials for EMAN2 == We are now hosting periodic live video-conferences/telecasts to discuss specific EMAN2 topics, in addition to some short tutorial videos. These tel...

2.3k - rev: 29 (current) last modified: 2017-02-23 19:24:55

EMAN2/Eman1Transition/CommandLine . . . 22 matches
...= Transitioning from EMAN1 to EMAN2 with command line tools = While the workflow is the correct choice for many users, we realize that some prefer to manipulate their data more d...

13.1k - rev: 9 (current) last modified: 2015-03-06 03:49:27

EMAN2/e2TomoSmall . . . 21 matches
... = EMAN2 Tomography mini-Workflow Tutorial = This version of the EMAN2 Tomography Pipeline tutorial is designed to run on well equipped laptops or standard workstations, unlike ...

27.4k - rev: 9 (current) last modified: 2020-02-03 23:19:59

EMAN2ImageFormats . . . 19 matches
...<<TableOfContents>> = Table of supported image formats in EMAN2 = ||Type ||Extension ||Read ||Write ||3D ||Image Stacks ||Volume Stacks ||Region I/O ||Comments || |||||||||||||||...

14.2k - rev: 69 (current) last modified: 2020-11-10 17:56:06

Eman2CProgQuickstart . . . 18 matches
... * [[http://blake.bcm.edu/eman2/coding_style.html|What is the EMAN2's coding style?]] * [[http://blake.bcm.edu/eman2/adding_processor.html|How to add a new processor in EMAN2?]] ...

0.6k - rev: 3 (current) last modified: 2010-05-24 19:52:38

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