Results 1 - 25 of 121 results out of about 4264 pages. (3.74 seconds)

EMAN2/Eman1Transition/Eman1v2 . . . 73 matches
...= An overview of changes between EMAN1 and EMAN2 = We have tried to preserve as many of the conventions from EMAN1 as possible, to limit the difficulty in making the transition. F...

12.7k - rev: 17 (current) last modified: 2014-04-11 12:54:55

EMAN2/COMPILE_EMAN2_ANACONDA-PRE-CONDA-ENVIRONMENTS . . . 44 matches
...ed Build, All Platforms = These instructions are for building with '''!NumPy v1.13'''. EMAN2 source lives on !GitHub, downloading the source is part of the instructions below. Sin...

6.5k - rev: 91 (current) last modified: 2019-11-01 14:27:54

EMAN2/Eman1Transition/CommandLine . . . 39 matches
...= Transitioning from EMAN1 to EMAN2 with command line tools = While the workflow is the correct choice for many users, we realize that some prefer to manipulate their data more di...

13.1k - rev: 9 (current) last modified: 2015-03-06 03:49:27

EMAN2/Eman1Transition . . . 25 matches
...= Moving from EMAN1 to EMAN2 = == A choice of paths == EMAN2 can be used in many different ways: * A high-level integrated workflow interface * Stand-alone GUI tools (like EMA...

1.7k - rev: 11 (current) last modified: 2012-07-31 13:00:20

EMAN2/Eman1Transition/QuickStart . . . 23 matches
...== Porting an EMAN1 refinement project to EMAN2.3 == ''Note : This page contains a simplified version of the EMAN2.1 tutorial, and assumes you are familiar with EMAN1. The full [[...

2.5k - rev: 36 (current) last modified: 2019-04-29 03:09:16

EMAN1/FAQ . . . 117 matches
...== FAQ == This is the new EMAN Frequently Asked Questions page : * YOU MUST CREATE AN ACCOUNT FOR YOURSELF TO EDIT THIS PAGE. Click on the Login button above, then follow the Use...

11.1k - rev: 96 (current) last modified: 2010-05-26 19:25:24

EMAN_COMPILE_MacOS_X_for_Distribution . . . 115 matches
... = PREFACE = This page contains instructions on compiling EMAN for OS X in a format suitable for distribution for the 4 main OS X supported architectures: 32 and 64 bit PowerPC ...

25.0k - rev: 43 (current) last modified: 2009-07-22 21:32:58

EMAN2/Eman1Transition/Python . . . 13 matches
...= EMAN2 scripting for EMAN1 users = The EMAN2 python library has many similarities to EMAN1. The main image data class is even called EMData, just like EMAN1. The most significant...

1.0k - rev: 4 (current) last modified: 2022-02-18 00:40:05

Eman2AppMetadata . . . 97 matches
...obsolete = == Global dictionaries/parameters == === 00image_counts database === Every EMAN2DB directory will contain an image count cache database which will contain a number of ...

23.9k - rev: 113 (current) last modified: 2013-08-11 18:07:28

EMAN2 . . . 68 matches
...= EMAN2.99.47 = Most of the pages are editable by any user that has registered an account on the server. To prevent spam, you need to email sludtke@bcm.edu to get an account on the...

7.2k - rev: 196 (current) last modified: 2023-04-15 01:59:49

EMAN2/Install/BinaryInstallAnaconda/2.99 . . . 67 matches
...it odd, but this IS a release version'' == Choices == There are three ways to install EMAN2: 1. Traditional Binary Installation (includes Anaconda/Miniconda install) * [[#Lin...

19.1k - rev: 41 (current) last modified: 2023-04-29 17:59:52

EMAN2/Tutorials . . . 59 matches
...= EMAN2 Introductory Tutorials = ''Please note that we are continuously developing and updating the tutorials. Most tutorials include the necessary data. If you have a request for ...

7.6k - rev: 179 (current) last modified: 2024-01-22 14:56:34

EMAN2/Install/SourceInstall . . . 57 matches
... {{{#!html <h1 style="margin-bottom:5px;"> Building EMAN2/SPARX/SPHIRE from Source </h1> <p style="font-size:110%; text-align:center; margin-top:5px; margin-left:20px; margin-ri...

14.7k - rev: 142 (current) last modified: 2023-10-10 03:25:26

EMAN2/Install/BinaryInstallAnaconda/ContinuousBuild . . . 51 matches
...<<TableOfContents()>> = Conda Installation Instructions = EMAN2 is now available as a conda package from our channel "cryoem" on anaconda.org. It can be installed via conda/m...

14.1k - rev: 76 (current) last modified: 2023-02-19 20:09:56

EMAN2/Programs . . . 50 matches
...== EMAN2 Programs == '''This page is very incomplete, but running any EMAN2 program with the '--help' option will provide documentation for that program.''' == Generic Docs == *...

5.5k - rev: 66 (current) last modified: 2022-04-07 20:57:00

EMAN2/Install/SourceInstall/2.31 . . . 49 matches
...ed Build, All Platforms = These instructions are for building with '''!NumPy v1.13'''. EMAN2 source lives on !GitHub, downloading the source is part of the instructions below. Sin...

7.0k - rev: 13 (current) last modified: 2023-02-03 08:25:48

EMAN2/Install . . . 46 matches
...= Installing EMAN2 / SPHIRE = === Conda Installation of eman-dev === [[EMAN2/Install/CondaInstall|Install EMAN2 in a conda environment]] === Binary Installation (most users sho...

1.7k - rev: 74 (current) last modified: 2023-02-03 08:52:24

EMAN2/Install/BinaryInstallAnaconda/2.91 . . . 45 matches
... Instructions v2.91</h1> }}} <<TableOfContents()>> '''''Note: If you need to install EMAN2 within an existing Anaconda installation, please follow the source installation instru...

13.5k - rev: 11 (current) last modified: 2022-01-27 13:47:43

EMAN1/Install . . . 44 matches
...== EMAN1 Installation and Tips == ''IMPORTANT NOTE FOR WINDOWS USERS'' : EMAN1 is NOT fully windows compatible. The GUI programs should largely work without problems, and many of t...

3.5k - rev: 33 (current) last modified: 2010-05-28 21:14:01

EMAN2/e2TomoSmall . . . 41 matches
...= EMAN2 Tomography and Subtomogram/Subtilt Averaging Workflow Tutorial = '''''Important note: Throughout the tutorial you will see a split between (small) and (large) instructions....

45.8k - rev: 56 (current) last modified: 2024-01-12 23:58:03

EMAN2/Library . . . 40 matches
...== Documentation for Python or C++ Programmers === ==== Introductory concepts ==== * [[EMAN2PythonStyleGuide|EMAN2 Python Programming Style Guide]] * [[Eman2ProgQuickstart|EMAN2 ...

2.5k - rev: 50 (current) last modified: 2023-01-02 19:26:26

EMAN2/Programs/e2refine . . . 37 matches
...== e2refine == This program is the heart of single particle reconstruction in EMAN2. It embodies the concept of an iterative 3-D single particle reconstruction in a single step, s...

14.0k - rev: 10 (current) last modified: 2012-09-21 11:59:03

EMAN2/ImageFormats . . . 37 matches
... <<TableOfContents>> = Table of supported image formats in EMAN2 = ||Type ||Extension ||Read ||Write ||3D ||Image Stacks ||Volume Stacks ||Bit Trunc. ||Region I/O ||Comments || ||...

24.4k - rev: 88 (current) last modified: 2024-02-01 04:08:01

EMAN2/DatabaseWarning . . . 36 matches
...NOTE: This page really only applies to EMAN2.0x. If you are using EMAN2.1+, you should no longer have any of these issues, since BDB has been deprecated in favor of HDF and JSON fi...

9.5k - rev: 30 (current) last modified: 2014-04-22 14:49:36

EMAN2/Concepts . . . 30 matches
...= EMAN2 Concepts and Conventions = === Box Size (Important) === * Particle [[EMAN2/BoxSize|box-size]] - Impacts quality and speed of reconstructions! === Data Storage === * Sup...

2.5k - rev: 50 (current) last modified: 2024-02-03 17:16:45

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