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If I have specified a version, it is the minimum version I have tested EMEN2 with. I cannot guarantee success with versions earlier than noted.  * Python 2.6+
  * Note: do not use Python 3.0+
  * http://www.python.org
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 * Berkeley DB 5.0.x
  * BDB is the storage and transactional backend for EMEN2
  * Note: Relatively recent 4.8.2x release are probably OK as well
  * http://www.oracle.com/technology/software/products/berkeley-db/index.html
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* Python 2.5+
 (note: do not use Python 3.0)
 http://www.python.org
 * bsddb3 5.0.x
  * Python bindings for Berkeley DB
  * Note: Relatively recent 4.8.2x release are probably OK as well
  * http://www.jcea.es/programacion/pybsddb.htm
  * "easy_install bsddb3"
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 * Mako Templates (latest)
  * A simple, fast templating system for Python
  * http://www.makotemplates.org/
  * "easy_install mako"
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* Berkeley DB 4.8.24+
 BDB is the storage and transactional backend for EMEN2
 * Note: I have not tested Berkeley DB 5.x
 http://www.oracle.com/technology/software/products/berkeley-db/index.html
 * Twisted 10.x+
  * An event-driven networking engine written in Python
  * http://twistedmatrix.com/trac/
  * "easy_install twisted"
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 * Markdown
  * Simplified rich-text editing
  * "easy_install Markdown"
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* bsddb3 4.8.4+ (latest)
 Python bindings for Berkeley DB
 * Note: I have not tested Berkeley DB 5.x
 http://www.jcea.es/programacion/pybsddb.htm
 "easy_install bsddb3"
== Optional ==
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 * pyOpenSSL
  * Network encryption
  * "easy_install pyOpenSSL"
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* Mako Templates (latest)
 A simple, fast templating system for Python
 http://www.makotemplates.org/
 "easy_install makotemplates"
 * EMAN2 (recommended)
  * EMAN2 is optionally used to generate browsable micrograph previews.
  * http://ncmi.bcm.edu/ncmi/software/counter_222/software_86
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* demjson (latest)
 A fast, compliant JSON module
 http://deron.meranda.us/python/demjson/
 "easy_install demjson"
 * note: EMEN2 may use the Python json standard library in the future


* Twisted 10.x+
 An event-driven networking engine written in Python
 http://twistedmatrix.com/trac/
 "easy_install twisted"


* PyYAML (latest)
 Configuration file is YAML-based
 "easy_install yaml"


* pyOpenSSL
 Network encryption
 "easy_install pyOpenSSL"


* EMAN2
 EMAN2 is optionally used to generate browsable micrograph previews.
 http://ncmi.bcm.edu/ncmi/software/counter_222/software_86
 * Matplotlib
  * Plotting support
  * Note: commonly installed with EMAN2
  * "easy_install matplotlib"

EMEN2 Dependencies

EMEN2 is dependent on several other packages. With the exception of Python, which is generally up to date and well-packaged on most systems, I recommend downloading the latest version from the project's site and installing it, or using easy_install for the package if possible. (Linux/Mac package management systems often have out of date software.)

Optional

  • pyOpenSSL
    • Network encryption
    • "easy_install pyOpenSSL"
  • EMAN2 (recommended)
  • Matplotlib
    • Plotting support
    • Note: commonly installed with EMAN2
    • "easy_install matplotlib"

EMEN2/Dependencies (last edited 2013-06-27 04:51:06 by IanRees)