attachment:namd_tutorial.zip of UTMBWorkshop2019

Attachment 'namd_tutorial.zip'

File Name                                            Modified              Size
namd_tutorial/                                 2019-05-14 11:06:02            0
namd_tutorial/par_all36_prot.prm               2019-05-14 06:32:34       184728
__MACOSX/                                      2019-05-14 12:51:26            0
__MACOSX/namd_tutorial/                        2019-05-14 12:51:26            0
__MACOSX/namd_tutorial/._par_all36_prot.prm    2019-05-14 06:32:34          212
namd_tutorial/3lq6-extrabonds-chirality.txt    2019-05-14 06:24:02        65465
__MACOSX/namd_tutorial/._3lq6-extrabonds-chirality.txt 2019-05-14 06:24:02          212
namd_tutorial/3lq6-psf.psf                     2019-05-14 06:25:56      2298949
__MACOSX/namd_tutorial/._3lq6-psf.psf          2019-05-14 06:25:56          212
namd_tutorial/3lq6-psf.pdb                     2019-05-14 06:25:18       762772
__MACOSX/namd_tutorial/._3lq6-psf.pdb          2019-05-14 06:25:18          212
namd_tutorial/3lq6-extrabonds-cispeptide.txt   2019-05-14 06:29:12        32154
__MACOSX/namd_tutorial/._3lq6-extrabonds-cispeptide.txt 2019-05-14 06:29:12          212
namd_tutorial/namd-mdff/                       2019-05-14 06:38:00            0
namd_tutorial/namd-mdff/3lq6-step1.restart.vel.old 2019-05-14 06:34:54       228820
__MACOSX/namd_tutorial/namd-mdff/              2019-05-14 12:51:26            0
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.restart.vel.old 2019-05-14 06:34:54          212
namd_tutorial/namd-mdff/3lq6-step1.dcd         2019-05-14 06:35:24       572436
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.dcd 2019-05-14 06:35:24          212
namd_tutorial/namd-mdff/3lq6-step1.coor        2019-05-14 06:35:32       762783
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.coor 2019-05-14 06:35:32          212
namd_tutorial/namd-mdff/3lq6-step1.restart.coor 2019-05-14 06:35:24       228820
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.restart.coor 2019-05-14 06:35:24          212
namd_tutorial/namd-mdff/3lq6-step1.restart.vel 2019-05-14 06:35:24       228820
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.restart.vel 2019-05-14 06:35:24          212
namd_tutorial/namd-mdff/3lq6-step1.xsc         2019-05-14 06:35:32           86
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.xsc 2019-05-14 06:35:32          212
namd_tutorial/namd-mdff/3lq6-step1.restart.coor.old 2019-05-14 06:34:54       228820
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.restart.coor.old 2019-05-14 06:34:54          212
namd_tutorial/namd-mdff/3lq6-step1.log         2019-05-14 06:35:32       109394
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.log 2019-05-14 06:35:32          212
namd_tutorial/namd-mdff/3lq6-step1.restart.xsc.old 2019-05-14 06:34:54           87
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.restart.xsc.old 2019-05-14 06:34:54          212
namd_tutorial/namd-mdff/3lq6-step1.restart.xsc 2019-05-14 06:35:24           87
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.restart.xsc 2019-05-14 06:35:24          212
namd_tutorial/namd-mdff/3lq6-step1.vel         2019-05-14 06:35:32       762782
__MACOSX/namd_tutorial/namd-mdff/._3lq6-step1.vel 2019-05-14 06:35:32          212
__MACOSX/namd_tutorial/._namd-mdff             2019-05-14 06:38:00          212
namd_tutorial/3lq6-grid.pdb                    2019-05-14 06:25:04       762797
__MACOSX/namd_tutorial/._3lq6-grid.pdb         2019-05-14 06:25:04          212
namd_tutorial/mdff_template.namd               2019-05-14 06:26:30         3645
__MACOSX/namd_tutorial/._mdff_template.namd    2019-05-14 06:26:30          212
namd_tutorial/3lq6-step1.namd                  2019-05-14 06:24:50          696
__MACOSX/namd_tutorial/._3lq6-step1.namd       2019-05-14 06:24:50          212
namd_tutorial/3lq6-extrabonds.txt              2019-05-14 06:24:30        35420
__MACOSX/namd_tutorial/._3lq6-extrabonds.txt   2019-05-14 06:24:30          212
namd_tutorial/MNV-Fab-trimmed.dx               2019-05-14 00:30:20     10468786
__MACOSX/namd_tutorial/._MNV-Fab-trimmed.dx    2019-05-14 00:30:20          212
namd_tutorial/3lq6.pdb                         2019-05-14 06:24:14       762772
__MACOSX/namd_tutorial/._3lq6.pdb              2019-05-14 06:24:14          212
namd_tutorial/MNV-Fab-trimmed.mrc              2019-05-14 00:59:04      8066032
__MACOSX/namd_tutorial/._MNV-Fab-trimmed.mrc   2019-05-14 00:59:04          212
namd_tutorial/3lq6-psf-docked.pdb              2019-05-14 06:28:46       775877
__MACOSX/namd_tutorial/._3lq6-psf-docked.pdb   2019-05-14 06:28:46          212
__MACOSX/._namd_tutorial                       2019-05-14 11:06:02          212

Attached Files

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[get | view] (2019-04-21 21:26:56, 6749.1 KB) [[attachment:EMAN2-3Tutorial.pdf]]
[get | view] (2019-05-06 04:24:17, 4888.3 KB) [[attachment:Mo1_Ludtke_Tomography.pdf]]
[get | view] (2019-05-06 04:23:51, 4723.2 KB) [[attachment:Mo2_Ludtke_HighResTomo.pdf]]
[get | view] (2019-05-06 20:02:36, 12372.3 KB) [[attachment:Mo3_Chen_DeepLearning.pdf]]
[get | view] (2019-05-06 19:57:05, 5955.3 KB) [[attachment:Mo3_Chen_cryoet.pdf]]
[get | view] (2019-05-09 05:13:55, 946.4 KB) [[attachment:Th1_Ludtke_Python.pdf]]
[get | view] (2019-05-12 16:43:32, 89105.1 KB) [[attachment:Th2_Afonine_Phenix.pdf]]
[get | view] (2019-05-09 04:11:11, 22325.9 KB) [[attachment:Th2_Baker_Chimera.pdf]]
[get | view] (2019-05-14 17:50:21, 1786.4 KB) [[attachment:Th4_Lynch_FlexibleFitting.pdf]]
[get | view] (2019-05-09 23:48:56, 5374.8 KB) [[attachment:Th5_Smith_Coot.pdf]]
[get | view] (2019-05-09 17:50:34, 9578.6 KB) [[attachment:Th6_Yen_Automation.pdf]]
[get | view] (2019-05-07 04:20:07, 6511.9 KB) [[attachment:Tu1_Ludtke_SPAIntro.pdf]]
[get | view] (2019-05-07 19:18:21, 4648.9 KB) [[attachment:Tu2_Sherman_CTF.pdf]]
[get | view] (2019-05-08 19:21:24, 13110.8 KB) [[attachment:Tu3_Chen_Picking.pdf]]
[get | view] (2019-05-11 03:19:20, 3832.2 KB) [[attachment:Tu4_Shaikh_InitialModel.pdf]]
[get | view] (2019-05-08 19:08:16, 2332.7 KB) [[attachment:We1_Ludtke_OtherSoftware.pdf]]
[get | view] (2019-05-08 19:08:54, 3607.3 KB) [[attachment:We2_Ludtke_Variability.pdf]]
[get | view] (2019-05-08 20:26:41, 25630.2 KB) [[attachment:We3_Baker_Symmetry.pdf]]
[get | view] (2019-05-08 19:06:57, 20234.0 KB) [[attachment:We4_Shaikh_Cryolo.pdf]]
[get | view] (2019-05-11 03:24:38, 5705.0 KB) [[attachment:We4_Shaikh_Reproducibility.pdf]]
[get | view] (2019-05-08 19:48:21, 9876.6 KB) [[attachment:We5_Baker_Resolution.pdf]]
[get | view] (2019-05-07 02:48:59, 1562.1 KB) [[attachment:coot_demo_data.tgz]]
[get | view] (2019-05-14 17:52:25, 13097.1 KB) [[attachment:namd_tutorial.zip]]

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