Diff for "Ws2011/Agenda"

Differences between revisions 6 and 7

Mon Mar 14, 2011

Theme - Single particle reconstruction

8:00 - 8:50	Registration	Outside PGH 200
8:50 - 9:10	Opening remarks/Introduction to Workshop	PGH200	Dr. Steve Ludtke
9:10 - 10:00	Introduction to transmission electron microscopy	PGH200	Dr. Wah Chiu
10:00 - 10:50	Image processing theory	PGH200	Dr. Richard Henderson
11:00 - 11:20	Coffee Break
11:20 - 12:30	Tutorial 1 - Getting started with EMAN2, CTF & class-averages	PGH232&200	Dr. Steve Ludtke
12:30 - 1:30	Lunch
1:30 - 3:00	Tutorial 1, contd - Initial models	PGH232&200	Dr. Steve Ludtke
3:00 - 3:20	Coffee Break
3:20 - 5:00	Tutorial 1, contd - First refinement & other issues	PGH232&200	Dr. Steve Ludtke
5:00 - 6:00	Research Lecture: Structural studies of TriC/CCT	PGH200	Dr. Yao Cong
6:00 - 9:00	Dinner onsite - with participant short talks	PGH200

Tue Mar 15, 2011

Theme - Helices & Heterogeneity

9:00 - 10:00	Helical filaments, heterogeneity and polymorphisms	PGH200	Dr. Edward Egelman
10:00 - 10:20	Coffee Break
10:20 - 11:20	Identification of conformational states using resampling	PGH200	Dr. Pawel Penczek
11:30 - 12:30	Tutorial 2 - Chimera	PGH232&200	Tom Goddard
12:30 - 1:30	Lunch
1:30 - 3:00	Tutorial 3 - Evaluating refinements, heterogeneity, etc.	PGH232&200	Dr. Steve Ludtke
3:00 - 3:15	Coffee Break
3:15 - 5:00	Tutorial 4 - Introduction to identification of conformational states in SPARX	PGH232&200	Dr. Pawel Penczek
5:15 - 6:15	Research Talk - Multiple states of a chaperonin and a method for analyzing heterogeneous conformations in cryo-EM	PGH200	Dr. Junjie (George) Zhang
6:30 - 9:00	Dinner	UH Library

Wed, Mar 16, 2011

Theme - Related methods

8:50 - 9:15	Tutorial 5 - Quick morning tutorial session	PGH232&200	Stephen Murray
9:15 - 10:00	Single particle tomography	PGH200	Dr. Mike Schmid
10:10 - 10:30	Coffee Break
10:30 - 11:00	EMDatabank.org & Data Archival	PGH200	Dr. Cathy Lawson
11:00 - 11:45	Tutorial 6 - Segmentation with Segger	PGH200&232	Dr. Greg Pintilie
11:45 - 12:45	Lunch
12:45 - 3:00	Tutorial 5 cont'd - Frealign, multirefine, etc.	PGH200&232	Dr. Steve Ludtke & Stephen Murray
3:00 - 3:30	Coffee Break
3:30 - 5:00	Tutorial 7 - Single Particle Tomography in EMAN2	PGH200&232	Jesus Montoya & Dr. John Flanagan
5:10 - 6:10	Research Talk - Structural studies of Calcium release channels	PGH200&232	Dr. Irina Serysheva
7:00 - 9:00	Workshop Banquet Bus leaves U of H at 6:30 !	Fung’s Kitchen

Thu, Mar 17, 2011

Theme: Validation & Modeling

9:00 - 10:00	Methods for Validation of Cryo-EM Maps	PGH200	Dr. Richard Henderson
10:00 - 10:30	Coffee Break
10:30 - 11:30	Real-space Refinement of Atomic Models in DireX	PGH200/232	Dr. Gunnar Schroeder
11:30 - 12:15	The EMEN2 Electronic Notebook and OODB	PGH200/232	Ian Rees
12:15 - 1:00	Lunch
1:00 - 2:30	Introduction to Rosetta	PGH200/232	Dr. Yao Cong
2:30 - 3:00	Coffee Break
3:00 - 4:30	Model Building and Analysis with Gorgon	PGH200/232	Dr. Matt Baker
4:30 - 5:30	Workshop wrap-up, final discussion

Workshop Ends

Note: Wah will host a dinner for any speakers who will be around Thurs evening

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-||5:15 - 6:15 ||[[attachment:2_6_zhang_mmcpn.pdf|Research Talk - Multiple states of a chaperonin and a method]] [[attachment:2_6_zhang_mmcpn.pdf|for analyzing heterogeneous conformations in cryo-EM]] ||PGH200 ||Dr. Junjie (George) Zhang ||
+||5:15 - 6:15 ||[[attachment:2_6_zhang_mmcpn.pdf|Research Talk - Multiple states of a chaperonin and a method for analyzing heterogeneous conformations in cryo-EM]] ||PGH200 ||Dr. Junjie (George) Zhang ||