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| = Single Particle Tomography in EMAN2 = == Wednesday - P.M. == |
= Single Particle Tomography in EMAN2, 2011 WORKSHOP in Houston, TX = |
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| This session will cover the new tools for single particle tomography in EMAN2. Unfortunately, this technique is very memory-intensive and compute-intensive. The 3 gb of ram available on the workshop computers is barely sufficient to do some small examples, and full 3-D alignments of large sets of particles can take many hours of computation. |
The SPT page has move to http://blake.bcm.edu/emanwiki/SPT/Spt |
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| So, for purposes of the tutorial, we will learn how to use the particle picker, and do a couple of small examples which can be completed in the available time. |
This is just an archaic page with the version of the tutorial used in the EMAN2 Workshop in March 2011. == OLD E2SPT USERS' GUIDE == * Single particle tomography USER'S GUIDE (March 2011). [[attachment:e2spt_users_guide_03_2011_workshop.pdf| e2spt_users_guide_03_2011_workshop.pdf |&do=get]] |
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| [[attachment:e2spt_data.zip| e2spt_data.zip|&do=get]] | Epsilon 15 virus data, used since the EMAN2 Workshop in 2010. |
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| == TUTORIAL DOCUMENT == [[attachment:eman2_spt_tutorial.pdf| eman2_spt_tutorial.pdf|&do=get]] (Note that this tutorial will be passed out at the workshop, and may still change before Wed) |
[[http://blake.grid.bcm.edu/wikifiles/SPT/e2spt_data.zip|e2spt_data.zip]] |
Single Particle Tomography in EMAN2, 2011 WORKSHOP in Houston, TX
The SPT page has move to http://blake.bcm.edu/emanwiki/SPT/Spt
This is just an archaic page with the version of the tutorial used in the EMAN2 Workshop in March 2011.
OLD E2SPT USERS' GUIDE
* Single particle tomography USER'S GUIDE (March 2011).
e2spt_users_guide_03_2011_workshop.pdf
DATA
Epsilon 15 virus data, used since the EMAN2 Workshop in 2010.