https://blake.bcm.edu/emanwiki/ 2026-04-05T08:06:59+00:00 https://blake.bcm.edu/emanwiki/ https://blake.bcm.edu/emanwiki/lib/exe/fetch.php?media=wiki:dokuwiki.svg text/html 2026-03-25T14:24:46+00:00 steveludtke (steveludtke@undisclosed.example.com) https://blake.bcm.edu/emanwiki/doku.php?id=eman2:programfiles&rev=1774448686&do=diff EMAN2 Output Files This page documents all of the various files produced by various tasks and workflows in EMAN2. While the format of the actual files will be one of the standard EMAN2 supported image formats in most cases, these pages will explain the contents of files with specific standard names. text/html 2026-03-20T17:45:20+00:00 steveludtke (steveludtke@undisclosed.example.com) https://blake.bcm.edu/emanwiki/doku.php?id=eman2:e3make3d_point&rev=1774028720&do=diff Preview of e3make3d_point for better 3-D reconstructions THE METHOD DESCRIBED ON THIS PAGE IS NOT YET PUBLISHED, IT IS PROVIDED TO GIVE PEOPLE THE OPPORTUNITY TO TRY IT OUT AS WE MAKE FINAL IMPROVEMENTS If you have any difficulties (or successes) with this method, please let us know, and feel free to ask questions (sludtke@bcm.edu). text/html 2026-03-20T05:23:15+00:00 steveludtke (steveludtke@undisclosed.example.com) https://blake.bcm.edu/emanwiki/doku.php?id=eman2:tutorials&rev=1773984195&do=diff EMAN2 Introductory Tutorials Please note that we are continuously developing and updating the tutorials. Most tutorials include the necessary data. If you have a request for a particular tutorial please feel free to email sludtke@bcm.edu . Video tutorials and discussions text/html 2026-03-20T05:21:09+00:00 steveludtke (steveludtke@undisclosed.example.com) https://blake.bcm.edu/emanwiki/doku.php?id=eman2:programs:e3make3d_point&rev=1773984069&do=diff e3make3d_point.py text/html 2026-03-07T00:23:29+00:00 steveludtke (steveludtke@undisclosed.example.com) https://blake.bcm.edu/emanwiki/doku.php?id=eman2:install:sourceinstall&rev=1772843009&do=diff Standard instructions for installing EMAN2/3 on Linux, macOS and WSL2 (Windows) ---------- While the instructions look long, in reality it should only take 10-15 minutes to complete the entire process (with a decent network connection). * We use text/html 2026-03-05T14:35:14+00:00 steveludtke (steveludtke@undisclosed.example.com) https://blake.bcm.edu/emanwiki/doku.php?id=eman2:negativestain&rev=1772721314&do=diff Negative Stain Single Particle Analysis There are some special problems which can arise when processing negative stain data. EMAN2 was primarily designed to work with Cryo data, so you may need to do things a little differently to get good results with negative stain.