#include "cuda_util.h"

Include dependency graph for cuda_processor.h:

Functions
void	emdata_processor_mult (float *data, const float &mult, const int nx, const int ny, const int nz)

void	emdata_processor_add (EMDataForCuda *cuda_data, const float &sub)

void	emdata_processor_to_value (EMDataForCuda *cuda_data, const float &value)

void	emdata_processor_correlation_texture (const EMDataForCuda *left, const int center)

void	emdata_processor_correlation (const EMDataForCuda left, const EMDataForCuda right, const int center)

void	emdata_unwrap (float *data, int r1, int r2, int xs, int num_pi, int dx, int dy, int weight_radial, int nx, int ny)

float *	emdata_transform_cuda (const float *const m, const int nx, const int ny, const int nz)

void	calc_ccf_cuda (float afft, const float bfft, const int nx, const int ny, const int nz)

void	calc_conv_cuda (float afft, const float bfft, const int nx, const int ny, const int nz)

CudaPeakInfo *	calc_max_location_wrap_cuda (const float *in, const int nx, const int ny, const int nz, const int maxdx, const int maxdy, const int maxdz)

CudaPeakInfoFloat *	calc_max_location_wrap_intp_cuda (const float *in, const int nx, const int ny, const int nz, const int maxdx, const int maxdy, const int maxdz)

void	emdata_phaseorigin_to_center (float *data, const int nx, const int ny, const int nz)

void	emdata_phaseorigin_to_corner (float *data, const int nx, const int ny, const int nz)

void	emdata_ri2ap (EMDataForCuda *cuda_data)

void	emdata_ap2ri (EMDataForCuda *cuda_data)

void	emdata_ri2inten (EMDataForCuda *cuda_data)

void	binarize_fourier_amp_processor (EMDataForCuda *cuda_data, const float &threshold)

void	mult_complex_efficient_cuda (float data, const float src_data, const int nx, const int ny, const int nz, const int radius)

void	mcf_cuda (const float data1, float data2, const int nx, const int ny, const int nz)

void	subtract_cuda (float *data, float f, const int nx, const int ny, const int nz)

float *	emdata_column_sum (const float *data, const int nx, const int ny)

void	emdata_rotate_180 (float *data, const int nx, const int ny)
	Rotates by 180 degrees using memory swapping, uses shared memory for efficiency Works on 2D images - they can be odd in any dimension. More...

Function Documentation

◆ binarize_fourier_amp_processor()

void binarize_fourier_amp_processor	(	EMDataForCuda *	cuda_data,
		const float &	threshold
	)

◆ calc_ccf_cuda()

void calc_ccf_cuda	(	float *	afft,
		const float *	bfft,
		const int	nx,
		const int	ny,
		const int	nz
	)

Referenced by EMAN::EMData::calc_ccf(), and EMAN::EMData::calc_ccfx().

◆ calc_conv_cuda()

void calc_conv_cuda	(	float *	afft,
		const float *	bfft,
		const int	nx,
		const int	ny,
		const int	nz
	)

Referenced by EMAN::EMData::calc_ccf().

◆ calc_max_location_wrap_cuda()

CudaPeakInfo * calc_max_location_wrap_cuda	(	const float *	in,
		const int	nx,
		const int	ny,
		const int	nz,
		const int	maxdx,
		const int	maxdy,
		const int	maxdz
	)

Referenced by calc_max_location_wrap(), EMAN::RT3DGridAligner::xform_align_nbest(), and EMAN::RT3DSphereAligner::xform_align_nbest().

◆ calc_max_location_wrap_intp_cuda()

CudaPeakInfoFloat * calc_max_location_wrap_intp_cuda	(	const float *	in,
		const int	nx,
		const int	ny,
		const int	nz,
		const int	maxdx,
		const int	maxdy,
		const int	maxdz
	)

◆ emdata_ap2ri()

void emdata_ap2ri ( EMDataForCuda * cuda_data )

◆ emdata_column_sum()

float * emdata_column_sum	(	const float *	data,
		const int	nx,
		const int	ny
	)

Referenced by EMAN::EMData::calc_ccfx().

◆ emdata_phaseorigin_to_center()

void emdata_phaseorigin_to_center	(	float *	data,
		const int	nx,
		const int	ny,
		const int	nz
	)

Referenced by EMAN::PhaseToCenterProcessor::process_inplace().

◆ emdata_phaseorigin_to_corner()

void emdata_phaseorigin_to_corner	(	float *	data,
		const int	nx,
		const int	ny,
		const int	nz
	)

Referenced by EMAN::PhaseToCornerProcessor::process_inplace().

◆ emdata_processor_add()

void emdata_processor_add	(	EMDataForCuda *	cuda_data,
		const float &	sub
	)

◆ emdata_processor_correlation()

void emdata_processor_correlation	(	const EMDataForCuda *	left,
		const EMDataForCuda *	right,
		const int	center
	)

◆ emdata_processor_correlation_texture()

void emdata_processor_correlation_texture	(	const EMDataForCuda *	left,
		const int	center
	)

◆ emdata_processor_mult()

void emdata_processor_mult	(	float *	data,
		const float &	mult,
		const int	nx,
		const int	ny,
		const int	nz
	)

◆ emdata_processor_to_value()

void emdata_processor_to_value	(	EMDataForCuda *	cuda_data,
		const float &	value
	)

◆ emdata_ri2ap()

void emdata_ri2ap ( EMDataForCuda * cuda_data )

◆ emdata_ri2inten()

void emdata_ri2inten ( EMDataForCuda * cuda_data )

◆ emdata_rotate_180()

void emdata_rotate_180	(	float *	data,
		const int	nx,
		const int	ny
	)

Rotates by 180 degrees using memory swapping, uses shared memory for efficiency Works on 2D images - they can be odd in any dimension.

Parameters

cuda_data an EMDataForCuda struct - should have the data from a 2D image - doesn't check this, it's assumed that the calling function knows what it's doing no return, processes the data inplace

Referenced by EMAN::Rotate180Processor::process_inplace().

◆ emdata_transform_cuda()

float * emdata_transform_cuda	(	const float *const	m,
		const int	nx,
		const int	ny,
		const int	nz
	)

Referenced by EMAN::TransformProcessor::process(), and EMAN::TransformProcessor::process_inplace().

◆ emdata_unwrap()

void emdata_unwrap	(	float *	data,
		int	r1,
		int	r2,
		int	xs,
		int	num_pi,
		int	dx,
		int	dy,
		int	weight_radial,
		int	nx,
		int	ny
	)

Referenced by EMAN::EMData::unwrap().

◆ mcf_cuda()

void mcf_cuda	(	const float *	data1,
		float *	data2,
		const int	nx,
		const int	ny,
		const int	nz
	)

Referenced by EMAN::EMData::calc_mutual_correlation().

◆ mult_complex_efficient_cuda()

void mult_complex_efficient_cuda	(	float *	data,
		const float *	src_data,
		const int	nx,
		const int	ny,
		const int	nz,
		const int	radius
	)