ChangeLog

This is a list of important changes by date. Only major changes will be listed here.

Note that if using binary versions, most reported changes will not appear in binary snapshots until ~5pm (Houston time) 1 day AFTER the date shown below.

• 5/20/2010
  • fixed problem causing e2refine2d.py to crash
  • fixed 'prefilt' option (PS match ref in workflow). Was not working properly and even when disabled was causing some problems.
• 5/19/2010
  • Added --check option to e2bdb.py for verifying databases. Can check for some possible database internal inconsistencies
• 4/28/2010
  • Fixed long standing bug with remote display of single images using VNC or NX (www.nomachine.com). Power spectra and individual images should now display correctly.
  • New --automask option on e2refine2d.py and e2classaverage.py will help with centering negative stain data (and maybe cryo data that doesn't center well)
  • New mask.auto2d filter, similar to mask.auto3d
• 4/22/2010
  • Convergence plot was being improperly calculated, giving the impression of low resolution. Corrected for new e2refine runs. Old runs can be updated with examples/redo_convergence.py in a project directory