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Revision 65 as of 2021-02-13 22:39:56
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= Compiling and Installing EMAN2 =
'''Most users, even 'advanced' users should select a binary install.''' If the binaries don't work for you for some reason (please [[mailto:sludtke@bcm.edu|let us know]], or if you need to write new low-level image processing functions, then you can resort to a source-based installation.)
= Installing EMAN2 / SPHIRE =
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EMAN2 uses an increasingly popular approach of writing all of the main computationally intensive image processing operations in C++, but writing all of the user programs, including those with GUIs (graphical user interfaces) in a scripting language called [[http://www.python.org|Python]]. All of these Python level programs can be edited by the end-user WITHOUT requiring a C++ development environment. Note that most users won't want or need even this level of customization.
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=== Binary Installation ===
 * [[EMAN2/Install/BinaryInstall|Installing EMAN2 binaries]]

=== Binary Installation (most users should do this) ===

[[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_versions|Download EMAN2 / SPHIRE binaries here]].

 * Install EMAN2 / SPHIRE binaries
   * [[EMAN2/Install/BinaryInstallAnaconda/2.9 |2.9 / 1.4]]
   * [[EMAN2/Install/BinaryInstallAnaconda |unstable / nightly / continuous]]
 * Install EMAN2 / SPHIRE binaries, previous versions
   * [[EMAN2/Install/BinaryInstallAnaconda/2.31|2.31 / 1.3]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.3 |2.3 / 1.2]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.22|2.22 / 1.1]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.21|2.21 / 1.0]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.2 |2.2 / 1.0beta]]
 * [[EMAN2/Install/BinaryInstall|Install EMAN2 binaries, pre 2.2]]
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 * [[http://blake.bcm.tmc.edu/eman/eman2/INSTALL|EMAN2's non-wiki installation instructions]] (Linux)
 * [[EMAN2/COMPILE_EMAN2_LINUX|Compile EMAN2 on Linux]]
 * [[EMAN2/COMPILE_EMAN2_WINDOWS|Compile EMAN2 with Visual Studio .NET 2005 on Windows XP]]
 * [[EMAN2/COMPILE_EMAN2_MAC_OS_X|Compile EMAN2 on OS X]]
 * [[EMAN2/ExternalLibraries|External libraries needed for EMAN2 compilation]]
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=== FAQ === EMAN2 source is hosted on [[http://github.com/cryoem/eman2|GitHub]], follow instructions below:

 * [[EMAN2/COMPILE_EMAN2_ANACONDA|Compile EMAN2 with Miniconda (Linux and OSX) (recommended)]]

==== For older versions ====
 * [[EMAN2/COMPILE_EMAN2_LINUX|Compile EMAN2 on Linux]] | EMAN2's [[http://blake.bcm.tmc.edu/eman/eman2/INSTALL|non-wiki]] installation instructions
 * [[EMAN2/COMPILE_EMAN2_MAC_OS_X|Compile EMAN2 on OS X with Anaconda]] (older version)
 * [[EMAN2/BREW_EMAN2_MAC_OS_X|Compile EMAN2 on OS X with Homebrew]] (not recommended)
 * [[COMPILE_EMAN2_VS2008|Compile EMAN2 with Visual Studio 2008 on Win7 32bit]]
 * [[EMAN2/COMPILE_EMAN2_WINDOWS|Compile EMAN2 with Visual Studio .NET 2005 on Windows XP (OBSOLETE)]]

=== FAQ (Outdated) ===
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 * [[EMAN2/FAQ/Py_initModule4_64|I try to run eman2 script, got error like "ImportError: ....libboost....: undefined symbol: Py_InitModule4_64", what does that mean?]]
 * [[EMAN2/FAQ/EMAN2Mandriva2009Segfault|I compiled EMAN2 on Mandriva 2009, everything looks OK, but I got segmentation fault when I try to run e2display.py or e2boxer.py.]]
 * [[EMAN2/FAQ/International|Does EMAN2 support Internationalization/other language conventions ?]]
 * [[EMAN2/FAQ/ClusterInstall|Why is EMAN2 distributed as an 'EMAN2' directory rather than Linux RPM's, etc. ?]]
 * [[EMAN2/FAQ/UseEman2_OSX|EMAN2 installed under OSX doesn't work properly. Any suggestions?]]
 * [[EMAN2/FAQ/UseEman2_Windows|EMAN2 installed under Windows doesn't work properly. Any suggestions?]]

EMAN2/Install (last edited 2024-09-13 17:36:10 by TunayDurmaz)