Differences between revisions 52 and 61 (spanning 9 versions)
Revision 52 as of 2019-08-29 08:32:35
Size: 2715
Comment: Change name to 2.31
Revision 61 as of 2020-12-15 18:06:19
Size: 2826
Editor: TunayDurmaz
Comment:
Deletions are marked like this. Additions are marked like this.
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= Installing EMAN2 =
The new EMAN2.2 binaries for recent OS versions are more heavily optimized than previous releases (and less backwards compatible). Still, it may be possible to achieve a 10-20% additional speedup if you setup GCC6 and compile with optimize-machine on a recent Linux version. Compiling from source on Linux is much easier than the other platforms. For Mac and Windows users, we strongly suggest using a binary.
= Installing EMAN2 / SPHIRE =
The new EMAN2.2/ SPHIRE 1.0 binaries for recent OS versions are more heavily optimized than previous releases (and less backwards compatible). Still, it may be possible to achieve a 10-20% additional speedup if you setup GCC6 and compile with optimize-machine on a recent Linux version. Compiling from source on Linux is much easier than the other platforms. For Mac and Windows users, we strongly suggest using a binary.
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[[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_versions|Download EMAN2 here]]. [[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_versions|Download EMAN2 / SPHIRE here]].
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 * [[EMAN2/Install/BinaryInstallAnaconda|Installing EMAN2 binaries, EMAN2.2 and later (NEW)]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.31|2.31]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.3|2.3]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.22|2.22]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.21|2.21]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.2|2.2]]
 * Installing EMAN2 / SPHIRE binaries, EMAN2.31 / SPHIRE 1.3 and later (NEW)
   * [[EMAN2/Install/BinaryInstallAnaconda/2.39| 2.39 / 1.3 (continuous / nightly)]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.31| 2.31 / 1.3]]
 * Installing EMAN2 / SPHIRE binaries, up to EMAN2.3 / SPHIRE 1.2

   * [[EMAN2/Install/BinaryInstallAnaconda/2.3| 2.3 / 1.2]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.22|2.22 / 1.1]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.21|2.21 / 1.0]]
   * [[EMAN2/Install/BinaryInstallAnaconda/2.2|2.2 / 1.0beta]]
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 * EMAN2 source is on GitHub (detailed instructions below): http://github.com/cryoem/eman2
 * [[EMAN2/COMPILE_EMAN2_ANACONDA|Compile EMAN2 with Anaconda (Linux and OSX)]] (recommended)
   * [[EMAN2/COMPILE_EMAN2_ANACONDA/2.31|2.31]]
   * [[EMAN2/COM
PILE_EMAN2_ANACONDA|2.2]]
 * EMAN2 source is on [[http://github.com/cryoem/eman2|GitHub]] (detailed instructions below): http://github.com/cryoem/eman2
 * Compile EMAN2 with Miniconda (Linux and OSX) (recommended)
   *
[[EMAN2/COMPILE_EMAN2_ANACONDA/2.39|EMAN 2.39 SPHIRE 1.3 (latest source code)]]
   * [[EMAN2/COMPILE_EMAN2_ANACONDA/2.31|EMAN 2.31 SPHIRE 1.3]]
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=== Build System Documentation (Work-In-Progress) ===
 * [[EMAN2/BUILD_SYSTEM_ANACONDA|Build, Package, Distribute with Conda, Constructor, Anaconda]]

Installing EMAN2 / SPHIRE

The new EMAN2.2/ SPHIRE 1.0 binaries for recent OS versions are more heavily optimized than previous releases (and less backwards compatible). Still, it may be possible to achieve a 10-20% additional speedup if you setup GCC6 and compile with optimize-machine on a recent Linux version. Compiling from source on Linux is much easier than the other platforms. For Mac and Windows users, we strongly suggest using a binary.

Download EMAN2 / SPHIRE here.

Binary Installation (most users should do this)

Compiling from Source and Setting Up a C++ Development Environment

For older versions

FAQ

icos_saff.png

EMAN2/Install (last edited 2024-09-13 17:36:10 by TunayDurmaz)