Michael Bell, Ludtke Lab (2014 - 2019)

All are welcome to use the materials provided here. Credit is greatly appreciated but not required.

Thesis

thesis.pdf, thesis.tex

Thesis Defense Presentation

defense_slides.key

Note: The presenter notes in this file contain a full transcription of my talk.

Posters

2019 Sealy Symposium for Structural Biology and Molecular Biophysics & 2018 Keck ARC 2018:

Keck Annual Research Conference 2017: keck_arc_2017.pdf

Biophysical Society Meeting 2017: biophysical_society_2017.pdf

2016 Biochemistry departmental retreat: biochem_retreat_2016.pdf

2016 Structural & Computational Biology and Molecular Biophysics Graduate Program Retreat: scbmb_retreat_2016.pdf

Talks

Slides from the 2015 EMDatabank map/model challenge wrap up meeting: mapchallenge_wrapup_2017.key

Slides from the 2018 Microscopy & Microanalysis meeting on the EMAN2 cryoET workflow: microscopy_microanalysis_2018.ppt

Slides from 2018 Quantitative and Computational Biosciences annual retreat on motion correction: qcbarc2018.key

Select Thesis Figures

Please see my thesis for corresponding figure captions.

Structural biology overview

struct_bio.png

Transmission electron microscopes (TEM)

tem.png

TEM grids

grid.png

Movie-mode imaging

movie.png

Basic image processing

imgproc.png

Fourier transforms

fft.png

Single particle analysis

spa.png

Contrast transfer function (CTF)

ctf.png

Gold Standard resolution measurement via Fourier Shell Correlation (FSC)

fsc.png

Electron cryo-tomography (cryoET)

cryoet.png

Subtomogram Averaging

subtomoavg.png

MichaelBell (last edited 2019-04-25 15:01:20 by MichaelBell)