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| All are welcome to use the materials provided here. Credit is appreciated but not required. | All are welcome to use the materials provided here. Credit is greatly appreciated but not required. |
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| == Thesis == | === Thesis === |
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| == Thesis Defense Presentation == | === Thesis Defense Presentation === |
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| == Posters == | '''Note:''' The presenter notes in this file contain a full transcription of my talk. |
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| [[attachment:cryoet_poster.pdf]], [[attachment:cryoet_poster.pptx]] | === Posters === |
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| [[attachment:scbmb_retreat_2016.pdf]] | 2019 Sealy Symposium for Structural Biology and Molecular Biophysics & 2018 Keck ARC 2018: [[attachment:cryoet_poster.pdf]], [[attachment:cryoet_poster.pptx]] |
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| [[attachment:biochem_retreat_2016.pdf]] | Keck Annual Research Conference 2017: [[attachment:keck_arc_2017.pdf]] |
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| [[attachment:biophysical_society_2017.pdf]] | Biophysical Society Meeting 2017: [[attachment:biophysical_society_2017.pdf]] |
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| [[attachment:keck_arc_2017.pdf]] | 2016 Biochemistry departmental retreat: [[attachment:biochem_retreat_2016.pdf]] |
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| [[attachment:sealy_2018.pdf]] | 2016 Structural & Computational Biology and Molecular Biophysics Graduate Program Retreat: [[attachment:scbmb_retreat_2016.pdf]] |
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| Note that these pdfs may contain typos. | === Talks === |
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| == Talks == | Talk given at 2015 EMDatabank map/model challenge wrap up meeting: [[attachment:mapchallenge_wrapup_2017.key]] |
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| [[attachment:mapchallenge_wrapup_2017.key]] | Talk given at 2018 Microscopy & Microanalysis meeting on the new cryoET workflow in EMAN2: [[attachment:microscopy_microanalysis_2018.ppt]] |
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| [[attachment:microscopy_microanalysis_2018.ppt]] | === Select Thesis Figures === |
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| == Select Thesis Figures == | Please see my thesis for corresponding figure captions. |
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| {{attachment:struct_bio.png||align="center"}} | |
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| {{attachment:tem.png||align="center"}} | '''Structural biology overview''' |
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| {{attachment:grid.png||align="center"}} | {{attachment:struct_bio.png||width=400}} |
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| {{attachment:movie.png||align="center"}} | '''Transmission electron microscopes (TEM)''' |
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| {{attachment:imgproc.png||align="center"}} | {{attachment:tem.png||width=400}} |
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| {{attachment:fft.png||align="center"}} | '''TEM grids''' |
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| {{attachment:spa.png||align="center"}} | {{attachment:grid.png||width=400}} |
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| {{attachment:ctf.png||align="center"}} | '''Movie-mode imaging''' |
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| {{attachment:fsc.png||align="center"}} | {{attachment:movie.png||width=400}} |
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| {{attachment:cryoet.png||align="center"}} | '''Basic image processing''' |
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| {{attachment:subtomoavg.png||align="center"}} | {{attachment:imgproc.png||width=400}} '''Fourier transforms''' {{attachment:fft.png||width=400}} '''Single particle analysis''' {{attachment:spa.png||width=400}} '''Contrast transfer function (CTF)''' {{attachment:ctf.png||width=400}} '''Gold Standard resolution measurement via Fourier Shell Correlation (FSC)''' {{attachment:fsc.png||width=400}} '''Electron cryo-tomography (cryoET)''' {{attachment:cryoet.png||width=400}} '''Subtomogram Averaging''' {{attachment:subtomoavg.png||width=400}} |
Michael Bell, Ludtke Lab (2014 - 2019)
All are welcome to use the materials provided here. Credit is greatly appreciated but not required.
Thesis
Thesis Defense Presentation
Note: The presenter notes in this file contain a full transcription of my talk.
Posters
2019 Sealy Symposium for Structural Biology and Molecular Biophysics & 2018 Keck ARC 2018: cryoet_poster.pdf, cryoet_poster.pptx
Keck Annual Research Conference 2017: keck_arc_2017.pdf
Biophysical Society Meeting 2017: biophysical_society_2017.pdf
2016 Biochemistry departmental retreat: biochem_retreat_2016.pdf
2016 Structural & Computational Biology and Molecular Biophysics Graduate Program Retreat: scbmb_retreat_2016.pdf
Talks
Talk given at 2015 EMDatabank map/model challenge wrap up meeting: mapchallenge_wrapup_2017.key
Talk given at 2018 Microscopy & Microanalysis meeting on the new cryoET workflow in EMAN2: microscopy_microanalysis_2018.ppt
Select Thesis Figures
Please see my thesis for corresponding figure captions.
Structural biology overview
Transmission electron microscopes (TEM)
TEM grids
Movie-mode imaging
Basic image processing
Fourier transforms
Single particle analysis
Contrast transfer function (CTF)
Gold Standard resolution measurement via Fourier Shell Correlation (FSC)
Electron cryo-tomography (cryoET)
Subtomogram Averaging
