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| Deletions are marked like this. | Additions are marked like this. |
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| frealign_v8.exe | . frealign_v8.exe |
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| cd /home/username/frealign_v8.09/src | . cd /home/username/frealign_v8.09/src |
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| 6) Use the appropraite Makefile. Assuming you are using the Intel 64-bit x86: | 6) Use the appropriate Makefile. Assuming you are using the Intel 64-bit x86: |
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| make -f Makefile_OSX_86-64_intel | . make -f Makefile_OSX_86-64_intel |
Frealign
Overview
FreAlign is a software suite for high-resolution refinement of 3D reconstructions from cryo-EM images of single particles.
You can download FreAlign here: http://emlab.rose2.brandeis.edu/frealign
And view the FreAlign documentation here: http://emlab.rose2.brandeis.edu/sites/default/files/readme_frealign.txt
Installation
Linux:
1) Download FreAlign from the above link.
2) Move the FreAlign tar file to your desired installation location
- ex. mv frealign_v8.09_######.tar.gz /home/username/
3) Unzip FreAlign: tar -xvf frealign_v8.09_######.tar.gz
4) In your .bashrc, include the command:
- export PATH=/home/username/frealign_v8.09/bin:$PATH
5) FreAlign is ready to be run. From the command line:
- frealign_v8.exe
OSX:
1) Download FreAlign from the above link.
2) Move the FreAlign tar file to your desired installation location
- ex. mv frealign_v8.09_######.tar.gz /home/username/
3) Unzip FreAlign: tar -xvf frealign_v8.09_######.tar.gz
4) Ensure you have the fortran compiler installed.
5) Change to the source directory in your frealign installation directory:
- cd /home/username/frealign_v8.09/src
6) Use the appropriate Makefile. Assuming you are using the Intel 64-bit x86:
- make -f Makefile_OSX_86-64_intel