Wed AM Practical

Segger is a tool for segmenting density maps and for quick rigid-body docking of structures into density maps [1].

The software is distributed as part of Chimera which will already be installed for the workshop.


Data: dowload the following files and place the in the same directory (in the tutorial, that directory will be referred to as the segger_data directory). Alternatively, download all the files in a zip file:

Rigid-body Docking



[1] Pintilie, G., Zhang, J., Goddard, T., Chiu, W., Gossard, D. Quantitative analysis of cryo-EM density map segmentation by watershed and scale-space filtering, and fitting of structures by alignment to regions, Journal of Structural Biology 170(3), pp 427-438, 2010

Ws2011/Segger (last edited 2011-03-12 02:24:39 by GregPintilie)