EMAN::CUDA_Aligner Class Reference

#include <aligner.h>

Public Member Functions
	CUDA_Aligner (int id)
void	finish ()
void	setup (int nima, int nx, int ny, int ring_length, int nring, int ou, float step, int kx, int ky, bool ctf)
void	insert_image (EMData *image, int num)
void	filter_stack (vector< float > ctf_params)
void	sum_oe (vector< float > ctf_params, vector< float > ali_params, EMData *ave1, EMData *ave2)
vector< float >	alignment_2d (EMData *ref_image, vector< float > sx, vector< float > sy, int silent)
vector< float >	ali2d_single_iter (EMData *ref_image, vector< float > ali_params, float csx, float csy, int silent, float delta)

Private Attributes
float *	image_stack
float *	image_stack_filtered
float *	ccf
int	NIMA
int	NX
int	NY
int	RING_LENGTH
int	NRING
int	OU
int	KX
int	KY
bool	CTF
float	STEP

Detailed Description

Definition at line 2114 of file aligner.h.

Constructor & Destructor Documentation

CUDA_Aligner()

EMAN::CUDA_Aligner::CUDA_Aligner

(

int

id

)

Member Function Documentation

ali2d_single_iter()

vector< float > EMAN::CUDA_Aligner::ali2d_single_iter	(	EMData *	ref_image,
		vector< float >	ali_params,
		float	csx,
		float	csy,
		int	silent,
		float	delta
	)

alignment_2d()

vector< float > EMAN::CUDA_Aligner::alignment_2d	(	EMData *	ref_image,
		vector< float >	sx,
		vector< float >	sy,
		int	silent
	)

filter_stack()

void EMAN::CUDA_Aligner::filter_stack

(

vector< float >

ctf_params

)

finish()

void EMAN::CUDA_Aligner::finish

(

)

insert_image()

void EMAN::CUDA_Aligner::insert_image	(	EMData *	image,
		int	num
	)

setup()

void EMAN::CUDA_Aligner::setup	(	int	nima,
		int	nx,
		int	ny,
		int	ring_length,
		int	nring,
		int	ou,
		float	step,
		int	kx,
		int	ky,
		bool	ctf
	)

sum_oe()

void EMAN::CUDA_Aligner::sum_oe	(	vector< float >	ctf_params,
		vector< float >	ali_params,
		EMData *	ave1,
		EMData *	ave2
	)

Member Data Documentation

ccf

float* EMAN::CUDA_Aligner::ccf

private

Definition at line 2135 of file aligner.h.

CTF

bool EMAN::CUDA_Aligner::CTF

private

Definition at line 2137 of file aligner.h.

image_stack

float* EMAN::CUDA_Aligner::image_stack

private

Definition at line 2134 of file aligner.h.

image_stack_filtered

float * EMAN::CUDA_Aligner::image_stack_filtered

private

Definition at line 2134 of file aligner.h.

KX

int EMAN::CUDA_Aligner::KX

private

Definition at line 2136 of file aligner.h.

KY

int EMAN::CUDA_Aligner::KY

private

Definition at line 2136 of file aligner.h.

NIMA

int EMAN::CUDA_Aligner::NIMA

private

Definition at line 2136 of file aligner.h.

NRING

int EMAN::CUDA_Aligner::NRING

private

Definition at line 2136 of file aligner.h.

NX

int EMAN::CUDA_Aligner::NX

private

Definition at line 2136 of file aligner.h.

NY

int EMAN::CUDA_Aligner::NY

private

Definition at line 2136 of file aligner.h.

OU

int EMAN::CUDA_Aligner::OU

private

Definition at line 2136 of file aligner.h.

RING_LENGTH

int EMAN::CUDA_Aligner::RING_LENGTH

private

Definition at line 2136 of file aligner.h.

STEP

float EMAN::CUDA_Aligner::STEP

private

Definition at line 2138 of file aligner.h.

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The documentation for this class was generated from the following file:

• aligner.h