averages over cal_half_width, then sets the value in a local block More...

#include <processor.h>

Inheritance diagram for EMAN::DiffBlockProcessor:

Collaboration diagram for EMAN::DiffBlockProcessor:

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Public Member Functions
void	process_inplace (EMData *image)
	To process an image in-place. More...

string	get_name () const
	Get the processor's name. More...

string	get_desc () const
	Get the descrition of this specific processor. More...

TypeDict	get_param_types () const
	Get processor parameter information in a dictionary. More...

Public Member Functions inherited from EMAN::Processor
virtual	~Processor ()

virtual EMData *	process (const EMData *const image)
	To proccess an image out-of-place. More...

virtual void	process_list_inplace (vector< EMData * > &images)
	To process multiple images using the same algorithm. More...

virtual Dict	get_params () const
	Get the processor parameters in a key/value dictionary. More...

virtual void	set_params (const Dict &new_params)
	Set the processor parameters using a key/value dictionary. More...

Static Public Member Functions
static Processor *	NEW ()

Static Public Member Functions inherited from EMAN::Processor
static string	get_group_desc ()
	Get the description of this group of processors. More...

static void	EMFourierFilterInPlace (EMData *fimage, Dict params)
	Compute a Fourier-filter processed image in place. More...

static EMData *	EMFourierFilter (EMData *fimage, Dict params)
	Compute a Fourier-processor processed image without altering the original image. More...

Static Public Attributes
static const string	NAME = "eman1.filter.blockrange"

Additional Inherited Members
Public Types inherited from EMAN::Processor
enum	fourier_filter_types { TOP_HAT_LOW_PASS , TOP_HAT_HIGH_PASS , TOP_HAT_BAND_PASS , TOP_HOMOMORPHIC , GAUSS_LOW_PASS , GAUSS_HIGH_PASS , GAUSS_BAND_PASS , GAUSS_INVERSE , GAUSS_HOMOMORPHIC , BUTTERWORTH_LOW_PASS , BUTTERWORTH_HIGH_PASS , BUTTERWORTH_HOMOMORPHIC , KAISER_I0 , KAISER_SINH , KAISER_I0_INVERSE , KAISER_SINH_INVERSE , SHIFT , TANH_LOW_PASS , TANH_HIGH_PASS , TANH_HOMOMORPHIC , TANH_BAND_PASS , RADIAL_TABLE , CTF_ }
	Fourier filter Processor type enum. More...

Protected Attributes inherited from EMAN::Processor
Dict	params

Detailed Description

averages over cal_half_width, then sets the value in a local block

Parameters

cal_half_width	cal_half_width is dx/dy for calculating an average
fill_half_width	fill_half_width is dx/dy for fill/step

Definition at line 4775 of file processor.h.

Member Function Documentation

◆ get_desc()

string EMAN::DiffBlockProcessor::get_desc ( ) const

inlinevirtual

Get the descrition of this specific processor.

This function must be overwritten by a subclass.

Returns: The description of this processor.

Implements EMAN::Processor.

Definition at line 4789 of file processor.h.

                {
                        return "averages over cal_half_width, then sets the value in a local block";
                }

◆ get_name()

string EMAN::DiffBlockProcessor::get_name ( ) const

inlinevirtual

Get the processor's name.

Each processor is identified by a unique name.

Returns: The processor's name.

Implements EMAN::Processor.

Definition at line 4780 of file processor.h.

                {
                        return NAME;
                }

References NAME.

Referenced by process_inplace().

◆ get_param_types()

TypeDict EMAN::DiffBlockProcessor::get_param_types ( ) const

inlinevirtual

Get processor parameter information in a dictionary.

Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.

Returns: A dictionary containing the parameter info.

Reimplemented from EMAN::Processor.

Definition at line 4794 of file processor.h.

                {
                        TypeDict d;
                        d.put("cal_half_width", EMObject::FLOAT, "cal_half_width is dx/dy for calculating an average");
                        d.put("fill_half_width", EMObject::FLOAT, "fill_half_width is dx/dy for fill/step");
                        return d;
                }

References EMAN::EMObject::FLOAT, and EMAN::TypeDict::put().

◆ NEW()

static Processor * EMAN::DiffBlockProcessor::NEW ( )

inlinestatic

Definition at line 4784 of file processor.h.

                {
                        return new DiffBlockProcessor();
                }

◆ process_inplace()

void DiffBlockProcessor::process_inplace ( EMData * image )

virtual

To process an image in-place.

For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.

Parameters

image The image to be processed.

Implements EMAN::Processor.

Definition at line 2710 of file processor.cpp.

{
        if (!image) {
                LOGWARN("NULL Image");
                return;
        }
 
        int nz = image->get_zsize();
 
        if (nz > 1) {
                LOGERR("%s Processor doesn't support 3D", get_name().c_str());
                throw ImageDimensionException("3D model not supported");
        }
 
        int nx = image->get_xsize();
        int ny = image->get_ysize();
 
        int v1 = params["cal_half_width"];
        int v2 = params["fill_half_width"];
 
        int v0 = v1 > v2 ? v1 : v2;
 
        if (v2 <= 0) {
                v2 = v1;
        }
 
        float *data = image->get_data();
 
        for (int y = v0; y <= ny - v0 - 1; y += v2) {
                for (int x = v0; x <= nx - v0 - 1; x += v2) {
 
                        float sum = 0;
                        for (int y1 = y - v1; y1 <= y + v1; y1++) {
                                for (int x1 = x - v1; x1 <= x + v1; x1++) {
                                        sum += data[x1 + y1 * nx];
                                }
                        }
                        float mean = sum / ((v1 * 2 + 1) * (v1 * 2 + 1));
 
                        for (int j = y - v2; j <= y + v2; j++) {
                                for (int i = x - v2; i <= x + v2; i++) {
                                        data[i + j * nx] = mean;
                                }
                        }
                }
        }
 
        image->update();
}

References get_name(), ImageDimensionException, LOGERR, LOGWARN, EMAN::Processor::params, v0, x, and y.

Member Data Documentation

◆ NAME

const string DiffBlockProcessor::NAME = "eman1.filter.blockrange"

static

Definition at line 4802 of file processor.h.

Referenced by get_name().

The documentation for this class was generated from the following files:

Public Member Functions

Static Public Member Functions

Static Public Attributes

Additional Inherited Members

Detailed Description

Member Function Documentation

◆ get_desc()

◆ get_name()

◆ get_param_types()

◆ NEW()

◆ process_inplace()

Member Data Documentation

◆ NAME