Fill zeroes at edges with nearest horizontal/vertical value damped towards Mean2. More...

#include <processor.h>

Inheritance diagram for EMAN::MeanZeroEdgeProcessor:

Collaboration diagram for EMAN::MeanZeroEdgeProcessor:

[legend]

Public Member Functions
void	process_inplace (EMData *image)
	To process an image in-place. More...

string	get_name () const
	Get the processor's name. More...

string	get_desc () const
	Get the descrition of this specific processor. More...

Public Member Functions inherited from EMAN::Processor
virtual	~Processor ()

virtual EMData *	process (const EMData *const image)
	To proccess an image out-of-place. More...

virtual void	process_list_inplace (vector< EMData * > &images)
	To process multiple images using the same algorithm. More...

virtual Dict	get_params () const
	Get the processor parameters in a key/value dictionary. More...

virtual void	set_params (const Dict &new_params)
	Set the processor parameters using a key/value dictionary. More...

virtual TypeDict	get_param_types () const
	Get processor parameter information in a dictionary. More...

Static Public Member Functions
static Processor *	NEW ()

Static Public Member Functions inherited from EMAN::Processor
static string	get_group_desc ()
	Get the description of this group of processors. More...

static void	EMFourierFilterInPlace (EMData *fimage, Dict params)
	Compute a Fourier-filter processed image in place. More...

static EMData *	EMFourierFilter (EMData *fimage, Dict params)
	Compute a Fourier-processor processed image without altering the original image. More...

Static Public Attributes
static const string	NAME = "mask.dampedzeroedgefill"

Additional Inherited Members
Public Types inherited from EMAN::Processor
enum	fourier_filter_types { TOP_HAT_LOW_PASS , TOP_HAT_HIGH_PASS , TOP_HAT_BAND_PASS , TOP_HOMOMORPHIC , GAUSS_LOW_PASS , GAUSS_HIGH_PASS , GAUSS_BAND_PASS , GAUSS_INVERSE , GAUSS_HOMOMORPHIC , BUTTERWORTH_LOW_PASS , BUTTERWORTH_HIGH_PASS , BUTTERWORTH_HOMOMORPHIC , KAISER_I0 , KAISER_SINH , KAISER_I0_INVERSE , KAISER_SINH_INVERSE , SHIFT , TANH_LOW_PASS , TANH_HIGH_PASS , TANH_HOMOMORPHIC , TANH_BAND_PASS , RADIAL_TABLE , CTF_ }
	Fourier filter Processor type enum. More...

Protected Attributes inherited from EMAN::Processor
Dict	params

Detailed Description

Fill zeroes at edges with nearest horizontal/vertical value damped towards Mean2.

Definition at line 5623 of file processor.h.

Member Function Documentation

◆ get_desc()

string EMAN::MeanZeroEdgeProcessor::get_desc ( ) const

inlinevirtual

Get the descrition of this specific processor.

This function must be overwritten by a subclass.

Returns: The description of this processor.

Implements EMAN::Processor.

Definition at line 5638 of file processor.h.

                {
                        return "Fill zeroes at edges with nearest horizontal/vertical value damped towards Mean2.";
                }

◆ get_name()

string EMAN::MeanZeroEdgeProcessor::get_name ( ) const

inlinevirtual

Get the processor's name.

Each processor is identified by a unique name.

Returns: The processor's name.

Implements EMAN::Processor.

Definition at line 5628 of file processor.h.

                {
                        return NAME;
                }

References NAME.

◆ NEW()

static Processor * EMAN::MeanZeroEdgeProcessor::NEW ( )

inlinestatic

Definition at line 5633 of file processor.h.

                {
                        return new MeanZeroEdgeProcessor();
                }

◆ process_inplace()

void MeanZeroEdgeProcessor::process_inplace ( EMData * image )

virtual

To process an image in-place.

For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.

Parameters

image The image to be processed.

Implements EMAN::Processor.

Definition at line 4359 of file processor.cpp.

{
        if (!image) {
                LOGWARN("NULL Image");
                return;
        }
        if (image->get_zsize() > 1) {
                LOGERR("MeanZeroEdgeProcessor doesn't support 3D model");
                throw ImageDimensionException("3D model not supported");
        }
 
        int nx = image->get_xsize();
        int ny = image->get_ysize();
        Dict dict = image->get_attr_dict();
        float mean_nonzero = dict.get("mean_nonzero");
 
        float *d = image->get_data();
        int i = 0;
        int j = 0;
 
        for (j = 0; j < ny; j++) {
                for (i = 0; i < nx - 1; i++) {
                        if (d[i + j * nx] != 0) {
                                break;
                        }
                }
 
                if (i == nx - 1) {
                        i = -1;
                }
 
                float v = d[i + j * nx] - mean_nonzero;
 
                while (i >= 0) {
                        v *= 0.9f;
                        d[i + j * nx] = v + mean_nonzero;
                        i--;
                }
 
 
                for (i = nx - 1; i > 0; i--) {
                        if (d[i + j * nx] != 0) {
                                break;
                        }
                }
 
                if (i == 0) {
                        i = nx;
                }
 
                v = d[i + j * nx] - mean_nonzero;
 
                while (i < nx) {
                        v *= .9f;
                        d[i + j * nx] = v + mean_nonzero;
                        i++;
                }
        }
 
 
        for (i = 0; i < nx; i++) {
                for (j = 0; j < ny; j++) {
                        if (d[i + j * nx] != 0)
                                break;
                }
 
                float v = d[i + j * nx] - mean_nonzero;
 
                while (j >= 0) {
                        v *= .9f;
                        d[i + j * nx] = v + mean_nonzero;
                        j--;
                }
 
                for (j = ny - 1; j > 0; j--) {
                        if (d[i + j * nx] != 0)
                                break;
                }
 
                v = d[i + j * nx] - mean_nonzero;
 
                while (j < ny) {
                        v *= .9f;
                        d[i + j * nx] = v + mean_nonzero;
                        j++;
                }
        }
 
        image->update();
}

References EMAN::Dict::get(), ImageDimensionException, LOGERR, and LOGWARN.

Member Data Documentation

◆ NAME

const string MeanZeroEdgeProcessor::NAME = "mask.dampedzeroedgefill"

static

Definition at line 5643 of file processor.h.

Referenced by get_name().

The documentation for this class was generated from the following files:

Public Member Functions

Static Public Member Functions

Static Public Attributes

Additional Inherited Members

Detailed Description

Member Function Documentation

◆ get_desc()

◆ get_name()

◆ NEW()

◆ process_inplace()

Member Data Documentation

◆ NAME