EMAN2
situsio.h
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1/*
2 * Author: Grant Tang, 06/07/2011 (gtang@bcm.edu)
3 * Copyright (c) 2000-2006 Baylor College of Medicine
4 *
5 * This software is issued under a joint BSD/GNU license. You may use the
6 * source code in this file under either license. However, note that the
7 * complete EMAN2 and SPARX software packages have some GPL dependencies,
8 * so you are responsible for compliance with the licenses of these packages
9 * if you opt to use BSD licensing. The warranty disclaimer below holds
10 * in either instance.
11 *
12 * This complete copyright notice must be included in any revised version of the
13 * source code. Additional authorship citations may be added, but existing
14 * author citations must be preserved.
15 *
16 * This program is free software; you can redistribute it and/or modify
17 * it under the terms of the GNU General Public License as published by
18 * the Free Software Foundation; either version 2 of the License, or
19 * (at your option) any later version.
20 *
21 * This program is distributed in the hope that it will be useful,
22 * but WITHOUT ANY WARRANTY; without even the implied warranty of
23 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
24 * GNU General Public License for more details.
25 *
26 * You should have received a copy of the GNU General Public License
27 * along with this program; if not, write to the Free Software
28 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
29 *
30 * */
31
32#ifndef eman__situsio_h__
33#define eman__situsio_h__ 1
34
35#include "imageio.h"
36
37namespace EMAN
38{
48 class SitusIO : public ImageIO
49 {
50 public:
51 explicit SitusIO(const string & fname, IOMode rw_mode = READ_ONLY);
52 ~SitusIO();
53
55
56 static bool is_valid(const void *first_block);
57
58 private:
60
62 int nx, ny, nz;
63
64 static const int SITUS_HEADER_LINES;
65 static const int FLOAT_SIZE;
66 static const int NFLOAT_PER_LINE;
67 static const char * OUTFORMAT;
68 static const int LINE_LENGTH; //10 number per line, echo take 11 character space
69 };
70
71
72}
73
74#endif //eman__situsio_h__
ImageIO classes are designed for reading/writing various electron micrography image formats,...
Definition: imageio.h:127
IOMode rw_mode
Definition: imageio.h:353
situs is a a Situs-specific format on a cubic lattice.
Definition: situsio.h:49
static const int SITUS_HEADER_LINES
Definition: situsio.h:64
float origx
Definition: situsio.h:61
float origy
Definition: situsio.h:61
static bool is_valid(const void *first_block)
Definition: situsio.cpp:182
static const int LINE_LENGTH
Definition: situsio.h:68
DEFINE_IMAGEIO_FUNC
Definition: situsio.h:54
float apix
Definition: situsio.h:61
static const char * OUTFORMAT
Definition: situsio.h:67
SitusIO(const string &fname, IOMode rw_mode=READ_ONLY)
Definition: situsio.cpp:44
static const int NFLOAT_PER_LINE
Definition: situsio.h:66
bool is_new_file
Definition: situsio.h:59
float origz
Definition: situsio.h:61
static const int FLOAT_SIZE
Definition: situsio.h:65
E2Exception class.
Definition: aligner.h:40