EMAN2
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- n -
name() :
EMAN::_BadAllocException
,
EMAN::_EmptyContainerException
,
EMAN::_FileAccessException
,
EMAN::_ImageDimensionException
,
EMAN::_ImageFormatException
,
EMAN::_ImageReadException
,
EMAN::_ImageWriteException
,
EMAN::_InvalidCallException
,
EMAN::_InvalidParameterException
,
EMAN::_InvalidStringException
,
EMAN::_InvalidValueException
,
EMAN::_NotExistingObjectException
,
EMAN::_NullPointerException
,
EMAN::_OutofRangeException
,
EMAN::_TypeException
,
EMAN::_UnexpectedBehaviorException
,
EMAN::E2Exception
nearest_projected_points() :
EMAN::GLUtil
need_swap() :
EMAN::SpiderIO
negate() :
EMAN::Transform
NEW() :
EMAN::AboveToZeroProcessor
,
EMAN::AbsoluteValueProcessor
,
EMAN::ACFCenterProcessor
,
EMAN::AddMaskShellProcessor
,
EMAN::AddNoiseProcessor
,
EMAN::AddRandomNoiseProcessor
,
EMAN::AddShapeProcessor
,
EMAN::AddSigmaNoiseProcessor
,
EMAN::AmpMultProcessor
,
EMAN::AmpweightFourierProcessor
,
EMAN::ApplyPolynomialProfileToHelix
,
EMAN::ApplySymProcessor
,
EMAN::AutoMask2DProcessor
,
EMAN::AutoMask3D2Processor
,
EMAN::AutoMask3DProcessor
,
EMAN::AutoMaskAsymUnit
,
EMAN::AutoMaskDustProcessor
,
EMAN::AverageXProcessor
,
EMAN::Axis0FourierProcessor
,
EMAN::AzSharpProcessor
,
EMAN::BackProjectionReconstructor
,
EMAN::BadLineXYProcessor
,
EMAN::BeamstopProcessor
,
EMAN::BilateralProcessor
,
EMAN::BinarizeFourierProcessor
,
EMAN::BinarizeProcessor
,
EMAN::BinaryBlackHatProcessor
,
EMAN::BinaryClosingProcessor
,
EMAN::BinaryDilationProcessor
,
EMAN::BinaryErosionProcessor
,
EMAN::BinaryExternalGradientProcessor
,
EMAN::BinaryInternalGradientProcessor
,
EMAN::BinaryMorphGradientProcessor
,
EMAN::BinaryOpeningProcessor
,
EMAN::BinaryOperateProcessor< Type >
,
EMAN::BinarySkeletonizerProcessor
,
EMAN::BinaryTopHatProcessor
,
EMAN::BispecSliceProcessor
,
EMAN::BooleanProcessor
,
EMAN::BoxMaxProcessor
,
EMAN::BoxMedianProcessor
,
EMAN::BoxSigmaProcessor
,
EMAN::BwMajorityProcessor
,
EMAN::BwThinningProcessor
,
EMAN::CccCmp
,
EMAN::CCCSNRProcessor
,
EMAN::CCDNormProcessor
,
EMAN::ChaoProjector
,
EMAN::CircularAverageAnalyzer
,
EMAN::CircularAverageBinarizeProcessor
,
EMAN::ClampingProcessor
,
EMAN::CollapseProcessor
,
EMAN::ComplexNormPixel
,
EMAN::ConvolutionKernelProcessor
,
EMAN::ConvolutionProcessor
,
EMAN::CSym
,
EMAN::CtfCAutoAverager
,
EMAN::CTFCorrProcessor
,
EMAN::CtfCWautoAverager
,
EMAN::CtfSimProcessor
,
EMAN::CTFSNRWeightProcessor
,
EMAN::CtfWtAverager
,
EMAN::CtfWtFiltAverager
,
EMAN::CutoffBlockProcessor
,
EMAN::CutToZeroProcessor
,
EMAN::DecayEdgeProcessor
,
EMAN::DiffBlockProcessor
,
EMAN::DirectionalSumProcessor
,
EMAN::DiscritizeProcessor
,
EMAN::DistanceSegmentProcessor
,
EMAN::DoGFourierProcessor
,
EMAN::DotCmp
,
EMAN::DSym
,
EMAN::EmanOrientationGenerator
,
EMAN::EnhanceProcessor
,
EMAN::EvenOrientationGenerator
,
EMAN::ExpProcessor
,
EMAN::FFTConeProcessor
,
EMAN::FFTPeakProcessor
,
EMAN::FFTProcessor
,
EMAN::FFTResampleProcessor
,
EMAN::FFTWedgeProcessor
,
EMAN::FileFourierProcessor
,
EMAN::FiniteProcessor
,
EMAN::FixSignProcessor
,
EMAN::FlattenBackgroundProcessor
,
EMAN::FlipProcessor
,
EMAN::FloorValueProcessor
,
EMAN::FourierGriddingProjector
,
EMAN::FourierInserter3DMode10
,
EMAN::FourierInserter3DMode11
,
EMAN::FourierInserter3DMode1
,
EMAN::FourierInserter3DMode2
,
EMAN::FourierInserter3DMode2l
,
EMAN::FourierInserter3DMode3
,
EMAN::FourierInserter3DMode5
,
EMAN::FourierInserter3DMode6
,
EMAN::FourierInserter3DMode7
,
EMAN::FourierInserter3DMode8
,
EMAN::FourierInserter3DMode9
,
EMAN::FourierIterReconstructor
,
EMAN::FourierReconstructor
,
EMAN::FourierReconstructorSimple2D
,
EMAN::FourierToCenterProcessor
,
EMAN::FourierToCornerProcessor
,
EMAN::FourierWeightAverager
,
EMAN::FRCCmp
,
EMAN::FRM2DAligner
,
EMAN::FSCFourierProcessor
,
EMAN::GaussFFTProjector
,
EMAN::GaussSegmentProcessor
,
EMAN::GaussZFourierProcessor
,
EMAN::GradientDirectionProcessor
,
EMAN::GradientMagnitudeProcessor
,
EMAN::GradientPlaneRemoverProcessor
,
EMAN::GradientRemoverProcessor
,
EMAN::GridKernelFixProcessor
,
EMAN::GrowSkeletonProcessor
,
EMAN::HarmonicProcessor
,
EMAN::HighpassAutoPeakProcessor
,
EMAN::HistogramBin
,
EMAN::HSym
,
EMAN::Icosahedral2Sym
,
EMAN::IcosahedralSym
,
EMAN::ImageAverager
,
EMAN::ImageDivergenceProcessor
,
EMAN::IndexMaskFileProcessor
,
EMAN::InertiaMatrixAnalyzer
,
EMAN::IntTranslateProcessor
,
EMAN::IterAverager
,
EMAN::IterBinMaskProcessor
,
EMAN::IterMultiMaskProcessor
,
EMAN::KMeansAnalyzer
,
EMAN::KmeansSegmentProcessor
,
EMAN::LaplacianDirectionProcessor
,
EMAN::LaplacianMagnitudeProcessor
,
EMAN::LaplacianProcessor
,
EMAN::LinearPyramidProcessor
,
EMAN::LinearRampFourierProcessor
,
EMAN::LinearRampProcessor
,
EMAN::LinearXformProcessor
,
EMAN::LocalMinAbsProcessor
,
EMAN::LocalNormProcessor
,
EMAN::LocalWeightAverager
,
EMAN::LodCmp
,
EMAN::LoGFourierProcessor
,
EMAN::LogProcessor
,
EMAN::LowpassAutoBProcessor
,
EMAN::LowpassRandomPhaseProcessor
,
EMAN::MakeRadiusProcessor
,
EMAN::MakeRadiusSquaredProcessor
,
EMAN::ManhattanDistanceProcessor
,
EMAN::MaskAzProcessor
,
EMAN::MaskEdgeMeanProcessor
,
EMAN::MaskGaussInvProcessor
,
EMAN::MaskGaussNonuniformProcessor
,
EMAN::MaskGaussProcessor
,
EMAN::MaskNoiseProcessor
,
EMAN::MaskPackProcessor
,
EMAN::MaskSharpProcessor
,
EMAN::MaskSoftProcessor
,
EMAN::MatchSFProcessor
,
EMAN::MaxShrinkProcessor
,
EMAN::MaxValProjector
,
EMAN::MeanShrinkProcessor
,
EMAN::MeanZeroEdgeProcessor
,
EMAN::MedianAverager
,
EMAN::MedianShrinkProcessor
,
EMAN::MinMaxAverager
,
EMAN::MinShrinkProcessor
,
EMAN::MinusPeakProcessor
,
EMAN::ModelEMCylinderProcessor
,
EMAN::nn4_ctf_rectReconstructor
,
EMAN::nn4_ctfReconstructor
,
EMAN::nn4_ctfwReconstructor
,
EMAN::nn4_ctfwsReconstructor
,
EMAN::nn4_rectReconstructor
,
EMAN::nn4Reconstructor
,
EMAN::nnSSNR_ctfReconstructor
,
EMAN::nnSSNR_Reconstructor
,
EMAN::NonConvexProcessor
,
EMAN::NormalizeByMassProcessor
,
EMAN::NormalizeCircleMeanProcessor
,
EMAN::NormalizeEdgeMeanProcessor
,
EMAN::NormalizeHistPeakProcessor
,
EMAN::NormalizeLREdgeMeanProcessor
,
EMAN::NormalizeMaskProcessor
,
EMAN::NormalizeMaxMinProcessor
,
EMAN::NormalizeRampNormVar
,
EMAN::NormalizeRowProcessor
,
EMAN::NormalizeStdProcessor
,
EMAN::NormalizeToLeastSquareProcessor
,
EMAN::NormalizeUnitProcessor
,
EMAN::NormalizeUnitSumProcessor
,
EMAN::NSigmaClampingProcessor
,
EMAN::ObjDensityProcessor
,
EMAN::ObjLabelProcessor
,
EMAN::OctahedralSym
,
EMAN::OptimumOrientationGenerator
,
EMAN::OptSubCmp
,
EMAN::OptVarianceCmp
,
EMAN::OutlierProcessor
,
EMAN::PaintProcessor
,
EMAN::PawelProjector
,
EMAN::PeakOnlyProcessor
,
EMAN::PhaseCmp
,
EMAN::PhaseToCenterProcessor
,
EMAN::PhaseToCornerProcessor
,
EMAN::PhaseToMassCenterProcessor
,
EMAN::PolyMaskProcessor
,
EMAN::PruneSkeletonProcessor
,
EMAN::QuadMinDotCmp
,
EMAN::RadialProcessor
,
EMAN::RampProcessor
,
EMAN::RandomOrientationGenerator
,
EMAN::RangeThresholdProcessor
,
EMAN::RangeZeroProcessor
,
EMAN::RealMedianReconstructor
,
EMAN::RealToFFTProcessor
,
EMAN::RecipCarefullyProcessor
,
EMAN::Refine3DAlignerGrid
,
EMAN::Refine3DAlignerQuaternion
,
EMAN::RefineAligner
,
EMAN::RefineAlignerCG
,
EMAN::ReplaceValuefromListProcessor
,
EMAN::ReverseProcessor
,
EMAN::Rotate180Processor
,
EMAN::RotateFlipAligner
,
EMAN::RotateFlipAlignerIterative
,
EMAN::RotateInFSProcessor
,
EMAN::RotatePrecenterAligner
,
EMAN::RotateTranslateAligner
,
EMAN::RotateTranslateAlignerBispec
,
EMAN::RotateTranslateAlignerIterative
,
EMAN::RotateTranslateAlignerPawel
,
EMAN::RotateTranslateBestAligner
,
EMAN::RotateTranslateFlipAligner
,
EMAN::RotateTranslateFlipAlignerIterative
,
EMAN::RotateTranslateFlipAlignerPawel
,
EMAN::RotateTranslateFlipScaleAligner
,
EMAN::RotateTranslateFlipScaleAlignerIterative
,
EMAN::RotateTranslateScaleAligner
,
EMAN::RotateTranslateScaleAlignerIterative
,
EMAN::RotationalAligner
,
EMAN::RotationalAlignerBispec
,
EMAN::RotationalAlignerIterative
,
EMAN::RotationalAverageProcessor
,
EMAN::RotationalSubstractProcessor
,
EMAN::RT2Dto3DTreeAligner
,
EMAN::RT2DTreeAligner
,
EMAN::RT3DGridAligner
,
EMAN::RT3DLocalTreeAligner
,
EMAN::RT3DSphereAligner
,
EMAN::RT3DSymmetryAligner
,
EMAN::RT3DTreeAligner
,
EMAN::RTFExhaustiveAligner
,
EMAN::RTFSlowExhaustiveAligner
,
EMAN::SaffOrientationGenerator
,
EMAN::ScaleAligner
,
EMAN::ScaleTransformProcessor
,
EMAN::SDGDProcessor
,
EMAN::SegmentSubunitProcessor
,
EMAN::SetBitsProcessor
,
EMAN::SetIsoPowProcessor
,
EMAN::SetSFProcessor
,
EMAN::ShapeAnalyzer
,
EMAN::SigmaAverager
,
EMAN::SigmaProcessor
,
EMAN::SigmaZeroEdgeProcessor
,
EMAN::SingleOrientationGenerator
,
EMAN::SmartMaskProcessor
,
EMAN::SNREvalProcessor
,
EMAN::SNRProcessor
,
EMAN::SqEuclideanCmp
,
EMAN::StandardProjector
,
EMAN::StripeXYProcessor
,
EMAN::SubtractOptProcessor
,
EMAN::SVDAnalyzer
,
EMAN::SymAlignProcessor
,
EMAN::SymAlignProcessorQuat
,
EMAN::SymSearchProcessor
,
EMAN::TestImageAxes
,
EMAN::TestImageCirclesphere
,
EMAN::TestImageCylinder
,
EMAN::TestImageDisc
,
EMAN::TestImageEllipse
,
EMAN::TestImageFourierGaussianBand
,
EMAN::TestImageFourierNoiseGaussian
,
EMAN::TestImageFourierNoiseProfile
,
EMAN::TestImageGaussian
,
EMAN::TestImageGradient
,
EMAN::TestImageHollowEllipse
,
EMAN::TestImageLineWave
,
EMAN::TestImageNoiseGauss
,
EMAN::TestImageNoiseUniformRand
,
EMAN::TestImagePureGaussian
,
EMAN::TestImageScurve
,
EMAN::TestImageSinewave
,
EMAN::TestImageSinewaveCircular
,
EMAN::TestImageSphericalWave
,
EMAN::TestImageSquarecube
,
EMAN::TestTomoImage
,
EMAN::TetrahedralSym
,
EMAN::ToCenterProcessor
,
EMAN::ToMassCenterProcessor
,
EMAN::ToMinvalProcessor
,
EMAN::TomoAverager
,
EMAN::TomoCccCmp
,
EMAN::TomoFscCmp
,
EMAN::TomoTiltAngleWeightProcessor
,
EMAN::TomoTiltEdgeMaskProcessor
,
EMAN::TomoWedgeCccCmp
,
EMAN::TomoWedgeFscCmp
,
EMAN::ToZeroProcessor
,
EMAN::TransformProcessor
,
EMAN::TranslationalAligner
,
EMAN::TransposeProcessor
,
EMAN::ValuePowProcessor
,
EMAN::ValueSqrtProcessor
,
EMAN::ValueSquaredProcessor
,
EMAN::VerticalCmp
,
EMAN::VerticalStripeProcessor
,
EMAN::WatershedProcessor
,
EMAN::WaveletProcessor
,
EMAN::WedgeFillProcessor
,
EMAN::Wiener2DAutoAreaProcessor
,
EMAN::Wiener2DFourierProcessor
,
EMAN::WienerFourierReconstructor
,
EMAN::XGradientProcessor
,
EMAN::XYZAligner
,
EMAN::XYZAverager
,
EMAN::XYZCmp
,
EMAN::XYZProcessor
,
EMAN::XYZProjector
,
EMAN::XYZReconstructor
,
EMAN::YGradientProcessor
,
EMAN::ZeroConstantProcessor
,
EMAN::ZeroEdgePlaneProcessor
,
EMAN::ZeroEdgeRowProcessor
,
EMAN::ZGradientProcessor
,
EMAN::ZThicknessProcessor
newfile_store() :
EMAN::newfile_store
nn4_ctf_rectReconstructor() :
EMAN::nn4_ctf_rectReconstructor
nn4_ctfReconstructor() :
EMAN::nn4_ctfReconstructor
nn4_ctfwReconstructor() :
EMAN::nn4_ctfwReconstructor
nn4_ctfwsReconstructor() :
EMAN::nn4_ctfwsReconstructor
nn4_rectReconstructor() :
EMAN::nn4_rectReconstructor
nn4Reconstructor() :
EMAN::nn4Reconstructor
nnSSNR_ctfReconstructor() :
EMAN::nnSSNR_ctfReconstructor
nnSSNR_Reconstructor() :
EMAN::nnSSNR_Reconstructor
nonconvex() :
EMAN::Util
norm() :
EMAN::Quaternion
normalize() :
EMAN::MorphologicalProcessor
,
EMAN::Quaternion
,
EMAN::RealPixelProcessor
,
EMAN::Vec2< Type >
,
EMAN::Vec3< Type >
,
EMAN::Vec4< Type >
,
EMAN::Vector3
,
EMAN::Vector4
normalize_threed() :
EMAN::ReconstructorVolumeData
NSigmaClampingProcessor() :
EMAN::NSigmaClampingProcessor
num_pix() :
EMAN::Decoder
,
EMAN::DecoderIx< I >
number_of_element() :
EMAN::Vec2< Type >
,
EMAN::Vec3< Type >
,
EMAN::Vec4< Type >
Numrinit() :
EMAN::PolarData
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