EMAN2: Class Members

Here is a list of all class members with links to the classes they belong to:

- n -

n : EMAN::EMObject, EMAN::ImageSort, EMAN::PDBReader, EMAN::PointArray
nalisum : EMAN::ImagicIO2::Imagic4D
name() : EMAN::_BadAllocException, EMAN::_EmptyContainerException, EMAN::_FileAccessException, EMAN::_ImageDimensionException, EMAN::_ImageFormatException, EMAN::_ImageReadException, EMAN::_ImageWriteException, EMAN::_InvalidCallException, EMAN::_InvalidParameterException, EMAN::_InvalidStringException, EMAN::_InvalidValueException, EMAN::_NotExistingObjectException, EMAN::_NullPointerException, EMAN::_OutofRangeException, EMAN::_TypeException, EMAN::_UnexpectedBehaviorException
NAME : EMAN::AboveToZeroProcessor, EMAN::AbsoluteValueProcessor, EMAN::ACFCenterProcessor, EMAN::AddMaskShellProcessor, EMAN::AddNoiseProcessor, EMAN::AddRandomNoiseProcessor, EMAN::AddShapeProcessor, EMAN::AddSigmaNoiseProcessor, EMAN::AmpMultProcessor, EMAN::AmpweightFourierProcessor, EMAN::ApplyPolynomialProfileToHelix, EMAN::ApplySymProcessor, EMAN::AutoMask2DProcessor, EMAN::AutoMask3D2Processor, EMAN::AutoMask3DProcessor, EMAN::AutoMaskAsymUnit, EMAN::AutoMaskDustProcessor, EMAN::AverageXProcessor, EMAN::Axis0FourierProcessor, EMAN::AzSharpProcessor, EMAN::BackProjectionReconstructor, EMAN::BadLineXYProcessor, EMAN::BeamstopProcessor, EMAN::BilateralProcessor, EMAN::BinarizeFourierProcessor, EMAN::BinarizeProcessor, EMAN::BinaryBlackHatProcessor, EMAN::BinaryClosingProcessor, EMAN::BinaryDilationProcessor, EMAN::BinaryErosionProcessor, EMAN::BinaryExternalGradientProcessor, EMAN::BinaryInternalGradientProcessor, EMAN::BinaryMorphGradientProcessor, EMAN::BinaryOpeningProcessor, EMAN::BinaryOperateProcessor< Type >, EMAN::BinarySkeletonizerProcessor, EMAN::BinaryTopHatProcessor, EMAN::BispecSliceProcessor, EMAN::BooleanProcessor, EMAN::BoxMaxProcessor, EMAN::BoxMedianProcessor, EMAN::BoxSigmaProcessor, EMAN::BwMajorityProcessor, EMAN::BwThinningProcessor, EMAN::CccCmp, EMAN::CCCSNRProcessor, EMAN::CCDNormProcessor, EMAN::ChaoProjector, EMAN::CircularAverageAnalyzer, EMAN::CircularAverageBinarizeProcessor, EMAN::ClampingProcessor, EMAN::CollapseProcessor, EMAN::ComplexNormPixel, EMAN::ConvolutionKernelProcessor, EMAN::ConvolutionProcessor, EMAN::CSym, EMAN::CtfCAutoAverager, EMAN::CTFCorrProcessor, EMAN::CtfCWautoAverager, EMAN::CtfSimProcessor, EMAN::CTFSNRWeightProcessor, EMAN::CtfWtAverager, EMAN::CtfWtFiltAverager, EMAN::CutoffBlockProcessor, EMAN::CutToZeroProcessor, EMAN::DecayEdgeProcessor, EMAN::DiffBlockProcessor, EMAN::DirectionalSumProcessor, EMAN::DiscritizeProcessor, EMAN::DistanceSegmentProcessor, EMAN::DoGFourierProcessor, EMAN::DotCmp, EMAN::DSym
name() : EMAN::E2Exception
NAME : EMAN::EmanOrientationGenerator, EMAN::EnhanceProcessor, EMAN::EvenOrientationGenerator, EMAN::ExpProcessor, EMAN::FFTConeProcessor, EMAN::FFTPeakProcessor, EMAN::FFTProcessor, EMAN::FFTResampleProcessor, EMAN::FFTWedgeProcessor, EMAN::FileFourierProcessor, EMAN::FiniteProcessor, EMAN::FixSignProcessor, EMAN::FlattenBackgroundProcessor, EMAN::FlipProcessor, EMAN::FloorValueProcessor, EMAN::FourierGriddingProjector, EMAN::FourierInserter3DMode10, EMAN::FourierInserter3DMode11, EMAN::FourierInserter3DMode1, EMAN::FourierInserter3DMode2, EMAN::FourierInserter3DMode2l, EMAN::FourierInserter3DMode3, EMAN::FourierInserter3DMode5, EMAN::FourierInserter3DMode6, EMAN::FourierInserter3DMode7, EMAN::FourierInserter3DMode8, EMAN::FourierInserter3DMode9, EMAN::FourierIterReconstructor, EMAN::FourierReconstructor, EMAN::FourierReconstructorSimple2D, EMAN::FourierToCenterProcessor, EMAN::FourierToCornerProcessor, EMAN::FourierWeightAverager, EMAN::FRCCmp, EMAN::FRM2DAligner, EMAN::FSCFourierProcessor
name : EMAN::Gatan::TagData, EMAN::Gatan::TagEntry, EMAN::Gatan::TagGroup, EMAN::GatanDM4::TagData, EMAN::GatanDM4::TagEntry, EMAN::GatanDM4::TagGroup
NAME : EMAN::GaussFFTProjector, EMAN::GaussSegmentProcessor, EMAN::GaussZFourierProcessor, EMAN::GradientDirectionProcessor, EMAN::GradientMagnitudeProcessor, EMAN::GradientPlaneRemoverProcessor, EMAN::GradientRemoverProcessor, EMAN::GridKernelFixProcessor, EMAN::GrowSkeletonProcessor, EMAN::HarmonicProcessor, EMAN::HighpassAutoPeakProcessor, EMAN::HistogramBin, EMAN::HSym, EMAN::Icosahedral2Sym, EMAN::IcosahedralSym, EMAN::ImageAverager, EMAN::ImageDivergenceProcessor, EMAN::IndexMaskFileProcessor, EMAN::InertiaMatrixAnalyzer, EMAN::IntTranslateProcessor, EMAN::IterAverager, EMAN::IterBinMaskProcessor, EMAN::IterMultiMaskProcessor, EMAN::KMeansAnalyzer, EMAN::KmeansSegmentProcessor, EMAN::LaplacianDirectionProcessor, EMAN::LaplacianMagnitudeProcessor, EMAN::LaplacianProcessor, EMAN::LinearPyramidProcessor, EMAN::LinearRampFourierProcessor, EMAN::LinearRampProcessor, EMAN::LinearXformProcessor, EMAN::LocalMinAbsProcessor, EMAN::LocalNormProcessor, EMAN::LocalWeightAverager, EMAN::LodCmp, EMAN::LoGFourierProcessor, EMAN::LogProcessor, EMAN::LowpassAutoBProcessor, EMAN::LowpassRandomPhaseProcessor, EMAN::MakeRadiusProcessor, EMAN::MakeRadiusSquaredProcessor, EMAN::ManhattanDistanceProcessor, EMAN::MaskAzProcessor, EMAN::MaskEdgeMeanProcessor, EMAN::MaskGaussInvProcessor, EMAN::MaskGaussNonuniformProcessor, EMAN::MaskGaussProcessor, EMAN::MaskNoiseProcessor, EMAN::MaskPackProcessor, EMAN::MaskSharpProcessor, EMAN::MaskSoftProcessor, EMAN::MatchSFProcessor, EMAN::MaxPixelOperator, EMAN::MaxShrinkProcessor, EMAN::MaxValProjector, EMAN::MeanShrinkProcessor, EMAN::MeanZeroEdgeProcessor, EMAN::MedianAverager, EMAN::MedianShrinkProcessor, EMAN::MinMaxAverager, EMAN::MinPixelOperator, EMAN::MinShrinkProcessor, EMAN::MinusPeakProcessor, EMAN::ModelEMCylinderProcessor, EMAN::nn4_ctf_rectReconstructor, EMAN::nn4_ctfReconstructor, EMAN::nn4_ctfwReconstructor, EMAN::nn4_ctfwsReconstructor, EMAN::nn4_rectReconstructor, EMAN::nn4Reconstructor, EMAN::nnSSNR_ctfReconstructor, EMAN::nnSSNR_Reconstructor, EMAN::NonConvexProcessor, EMAN::NormalizeByMassProcessor, EMAN::NormalizeCircleMeanProcessor, EMAN::NormalizeEdgeMeanProcessor, EMAN::NormalizeHistPeakProcessor, EMAN::NormalizeLREdgeMeanProcessor, EMAN::NormalizeMaskProcessor, EMAN::NormalizeMaxMinProcessor, EMAN::NormalizeRampNormVar, EMAN::NormalizeRowProcessor, EMAN::NormalizeStdProcessor, EMAN::NormalizeToLeastSquareProcessor, EMAN::NormalizeUnitProcessor, EMAN::NormalizeUnitSumProcessor, EMAN::NSigmaClampingProcessor, EMAN::ObjDensityProcessor, EMAN::ObjLabelProcessor, EMAN::OctahedralSym, EMAN::OptimumOrientationGenerator, EMAN::OptSubCmp, EMAN::OptVarianceCmp, EMAN::OutlierProcessor, EMAN::PaintProcessor, EMAN::PawelProjector, EMAN::PeakOnlyProcessor, EMAN::PhaseCmp, EMAN::PhaseToCenterProcessor, EMAN::PhaseToCornerProcessor, EMAN::PhaseToMassCenterProcessor, EMAN::PolyMaskProcessor, EMAN::PruneSkeletonProcessor, EMAN::QuadMinDotCmp, EMAN::RadialProcessor, EMAN::RampProcessor, EMAN::RandomOrientationGenerator, EMAN::RangeThresholdProcessor, EMAN::RangeZeroProcessor, EMAN::RealMedianReconstructor, EMAN::RealToFFTProcessor, EMAN::RecipCarefullyProcessor, EMAN::Refine3DAlignerGrid, EMAN::Refine3DAlignerQuaternion, EMAN::RefineAligner, EMAN::RefineAlignerCG, EMAN::ReplaceValuefromListProcessor, EMAN::ReverseProcessor, EMAN::Rotate180Processor, EMAN::RotateFlipAligner, EMAN::RotateFlipAlignerIterative, EMAN::RotateInFSProcessor, EMAN::RotatePrecenterAligner, EMAN::RotateTranslateAligner, EMAN::RotateTranslateAlignerBispec, EMAN::RotateTranslateAlignerIterative, EMAN::RotateTranslateAlignerPawel, EMAN::RotateTranslateBestAligner, EMAN::RotateTranslateFlipAligner, EMAN::RotateTranslateFlipAlignerIterative, EMAN::RotateTranslateFlipAlignerPawel, EMAN::RotateTranslateFlipScaleAligner, EMAN::RotateTranslateFlipScaleAlignerIterative, EMAN::RotateTranslateScaleAligner, EMAN::RotateTranslateScaleAlignerIterative, EMAN::RotationalAligner, EMAN::RotationalAlignerBispec, EMAN::RotationalAlignerIterative, EMAN::RotationalAverageProcessor, EMAN::RotationalSubstractProcessor, EMAN::RT2Dto3DTreeAligner, EMAN::RT2DTreeAligner, EMAN::RT3DGridAligner, EMAN::RT3DLocalTreeAligner, EMAN::RT3DSphereAligner, EMAN::RT3DSymmetryAligner, EMAN::RT3DTreeAligner, EMAN::RTFExhaustiveAligner, EMAN::RTFSlowExhaustiveAligner, EMAN::SaffOrientationGenerator, EMAN::ScaleAligner, EMAN::ScaleTransformProcessor, EMAN::SDGDProcessor, EMAN::SegmentSubunitProcessor, EMAN::SetBitsProcessor, EMAN::SetIsoPowProcessor, EMAN::SetSFProcessor, EMAN::ShapeAnalyzer, EMAN::SigmaAverager, EMAN::SigmaProcessor, EMAN::SigmaZeroEdgeProcessor, EMAN::SingleOrientationGenerator, EMAN::SmartMaskProcessor, EMAN::SNREvalProcessor, EMAN::SNRProcessor, EMAN::SqEuclideanCmp, EMAN::StandardProjector, EMAN::StripeXYProcessor, EMAN::SubtractOptProcessor, EMAN::SVDAnalyzer, EMAN::SymAlignProcessor, EMAN::SymAlignProcessorQuat, EMAN::SymSearchProcessor, EMAN::TestImageAxes, EMAN::TestImageCirclesphere, EMAN::TestImageCylinder, EMAN::TestImageDisc, EMAN::TestImageEllipse, EMAN::TestImageFourierGaussianBand, EMAN::TestImageFourierNoiseGaussian, EMAN::TestImageFourierNoiseProfile, EMAN::TestImageGaussian, EMAN::TestImageGradient, EMAN::TestImageHollowEllipse, EMAN::TestImageLineWave, EMAN::TestImageNoiseGauss, EMAN::TestImageNoiseUniformRand, EMAN::TestImagePureGaussian, EMAN::TestImageScurve, EMAN::TestImageSinewave, EMAN::TestImageSinewaveCircular, EMAN::TestImageSphericalWave, EMAN::TestImageSquarecube, EMAN::TestTomoImage, EMAN::TetrahedralSym, EMAN::ToCenterProcessor, EMAN::ToMassCenterProcessor, EMAN::ToMinvalProcessor, EMAN::TomoAverager, EMAN::TomoCccCmp, EMAN::TomoFscCmp, EMAN::TomoTiltAngleWeightProcessor, EMAN::TomoTiltEdgeMaskProcessor, EMAN::TomoWedgeCccCmp, EMAN::TomoWedgeFscCmp, EMAN::ToZeroProcessor, EMAN::TransformProcessor, EMAN::TranslationalAligner, EMAN::TransposeProcessor, EMAN::ValuePowProcessor, EMAN::ValueSqrtProcessor, EMAN::ValueSquaredProcessor, EMAN::VerticalCmp, EMAN::VerticalStripeProcessor, EMAN::WatershedProcessor, EMAN::WaveletProcessor, EMAN::WedgeFillProcessor, EMAN::Wiener2DAutoAreaProcessor, EMAN::Wiener2DFourierProcessor, EMAN::WienerFourierReconstructor, EMAN::XGradientProcessor, EMAN::XYZAligner, EMAN::XYZAverager, EMAN::XYZCmp, EMAN::XYZProcessor, EMAN::XYZProjector, EMAN::XYZReconstructor, EMAN::YGradientProcessor, EMAN::ZeroConstantProcessor, EMAN::ZeroEdgePlaneProcessor, EMAN::ZeroEdgeRowProcessor, EMAN::ZGradientProcessor, EMAN::ZThicknessProcessor
ncflag : EMAN::ImagicIO::ImagicHeader
nchanged : EMAN::KMeansAnalyzer
ncit : EMAN::Symmetry3D
ncls : EMAN::KMeansAnalyzer
nclstot : EMAN::KMeansAnalyzer
nd1 : EMAN::MrcIO::FeiMrcHeader
nd2 : EMAN::MrcIO::FeiMrcHeader
ndim : EMAN::FloatPoint, EMAN::IntPoint
nearest_projected_points() : EMAN::GLUtil
need_swap() : EMAN::SpiderIO
needtobind : EMAN::MarchingCubes
needtorecolor : EMAN::ColorRGBGenerator
negate() : EMAN::Transform
NEW() : EMAN::AboveToZeroProcessor, EMAN::AbsoluteValueProcessor, EMAN::ACFCenterProcessor, EMAN::AddMaskShellProcessor, EMAN::AddNoiseProcessor, EMAN::AddRandomNoiseProcessor, EMAN::AddShapeProcessor, EMAN::AddSigmaNoiseProcessor, EMAN::AmpMultProcessor, EMAN::AmpweightFourierProcessor, EMAN::ApplyPolynomialProfileToHelix, EMAN::ApplySymProcessor, EMAN::AutoMask2DProcessor, EMAN::AutoMask3D2Processor, EMAN::AutoMask3DProcessor, EMAN::AutoMaskAsymUnit, EMAN::AutoMaskDustProcessor, EMAN::AverageXProcessor, EMAN::Axis0FourierProcessor, EMAN::AzSharpProcessor, EMAN::BackProjectionReconstructor, EMAN::BadLineXYProcessor, EMAN::BeamstopProcessor, EMAN::BilateralProcessor, EMAN::BinarizeFourierProcessor, EMAN::BinarizeProcessor, EMAN::BinaryBlackHatProcessor, EMAN::BinaryClosingProcessor, EMAN::BinaryDilationProcessor, EMAN::BinaryErosionProcessor, EMAN::BinaryExternalGradientProcessor, EMAN::BinaryInternalGradientProcessor, EMAN::BinaryMorphGradientProcessor, EMAN::BinaryOpeningProcessor, EMAN::BinaryOperateProcessor< Type >, EMAN::BinarySkeletonizerProcessor, EMAN::BinaryTopHatProcessor, EMAN::BispecSliceProcessor, EMAN::BooleanProcessor, EMAN::BoxMaxProcessor, EMAN::BoxMedianProcessor, EMAN::BoxSigmaProcessor, EMAN::BwMajorityProcessor, EMAN::BwThinningProcessor, EMAN::CccCmp, EMAN::CCCSNRProcessor, EMAN::CCDNormProcessor, EMAN::ChaoProjector, EMAN::CircularAverageAnalyzer, EMAN::CircularAverageBinarizeProcessor, EMAN::ClampingProcessor, EMAN::CollapseProcessor, EMAN::ComplexNormPixel, EMAN::ConvolutionKernelProcessor, EMAN::ConvolutionProcessor, EMAN::CSym, EMAN::CtfCAutoAverager, EMAN::CTFCorrProcessor, EMAN::CtfCWautoAverager, EMAN::CtfSimProcessor, EMAN::CTFSNRWeightProcessor, EMAN::CtfWtAverager, EMAN::CtfWtFiltAverager, EMAN::CutoffBlockProcessor, EMAN::CutToZeroProcessor, EMAN::DecayEdgeProcessor, EMAN::DiffBlockProcessor, EMAN::DirectionalSumProcessor, EMAN::DiscritizeProcessor, EMAN::DistanceSegmentProcessor, EMAN::DoGFourierProcessor, EMAN::DotCmp, EMAN::DSym, EMAN::EmanOrientationGenerator, EMAN::EnhanceProcessor, EMAN::EvenOrientationGenerator, EMAN::ExpProcessor, EMAN::FFTConeProcessor, EMAN::FFTPeakProcessor, EMAN::FFTProcessor, EMAN::FFTResampleProcessor, EMAN::FFTWedgeProcessor, EMAN::FileFourierProcessor, EMAN::FiniteProcessor, EMAN::FixSignProcessor, EMAN::FlattenBackgroundProcessor, EMAN::FlipProcessor, EMAN::FloorValueProcessor, EMAN::FourierGriddingProjector, EMAN::FourierInserter3DMode10, EMAN::FourierInserter3DMode11, EMAN::FourierInserter3DMode1, EMAN::FourierInserter3DMode2, EMAN::FourierInserter3DMode2l, EMAN::FourierInserter3DMode3, EMAN::FourierInserter3DMode5, EMAN::FourierInserter3DMode6, EMAN::FourierInserter3DMode7, EMAN::FourierInserter3DMode8, EMAN::FourierInserter3DMode9, EMAN::FourierIterReconstructor, EMAN::FourierReconstructor, EMAN::FourierReconstructorSimple2D, EMAN::FourierToCenterProcessor, EMAN::FourierToCornerProcessor, EMAN::FourierWeightAverager, EMAN::FRCCmp, EMAN::FRM2DAligner, EMAN::FSCFourierProcessor, EMAN::GaussFFTProjector, EMAN::GaussSegmentProcessor, EMAN::GaussZFourierProcessor, EMAN::GradientDirectionProcessor, EMAN::GradientMagnitudeProcessor, EMAN::GradientPlaneRemoverProcessor, EMAN::GradientRemoverProcessor, EMAN::GridKernelFixProcessor, EMAN::GrowSkeletonProcessor, EMAN::HarmonicProcessor, EMAN::HighpassAutoPeakProcessor, EMAN::HistogramBin, EMAN::HSym, EMAN::Icosahedral2Sym, EMAN::IcosahedralSym, EMAN::ImageAverager, EMAN::ImageDivergenceProcessor, EMAN::IndexMaskFileProcessor, EMAN::InertiaMatrixAnalyzer, EMAN::IntTranslateProcessor, EMAN::IterAverager, EMAN::IterBinMaskProcessor, EMAN::IterMultiMaskProcessor, EMAN::KMeansAnalyzer, EMAN::KmeansSegmentProcessor, EMAN::LaplacianDirectionProcessor, EMAN::LaplacianMagnitudeProcessor, EMAN::LaplacianProcessor, EMAN::LinearPyramidProcessor, EMAN::LinearRampFourierProcessor, EMAN::LinearRampProcessor, EMAN::LinearXformProcessor, EMAN::LocalMinAbsProcessor, EMAN::LocalNormProcessor, EMAN::LocalWeightAverager, EMAN::LodCmp, EMAN::LoGFourierProcessor, EMAN::LogProcessor, EMAN::LowpassAutoBProcessor, EMAN::LowpassRandomPhaseProcessor, EMAN::MakeRadiusProcessor, EMAN::MakeRadiusSquaredProcessor, EMAN::ManhattanDistanceProcessor, EMAN::MaskAzProcessor, EMAN::MaskEdgeMeanProcessor, EMAN::MaskGaussInvProcessor, EMAN::MaskGaussNonuniformProcessor, EMAN::MaskGaussProcessor, EMAN::MaskNoiseProcessor, EMAN::MaskPackProcessor, EMAN::MaskSharpProcessor, EMAN::MaskSoftProcessor, EMAN::MatchSFProcessor, EMAN::MaxShrinkProcessor, EMAN::MaxValProjector, EMAN::MeanShrinkProcessor, EMAN::MeanZeroEdgeProcessor, EMAN::MedianAverager, EMAN::MedianShrinkProcessor, EMAN::MinMaxAverager, EMAN::MinShrinkProcessor, EMAN::MinusPeakProcessor, EMAN::ModelEMCylinderProcessor, EMAN::nn4_ctf_rectReconstructor, EMAN::nn4_ctfReconstructor, EMAN::nn4_ctfwReconstructor, EMAN::nn4_ctfwsReconstructor, EMAN::nn4_rectReconstructor, EMAN::nn4Reconstructor, EMAN::nnSSNR_ctfReconstructor, EMAN::nnSSNR_Reconstructor, EMAN::NonConvexProcessor, EMAN::NormalizeByMassProcessor, EMAN::NormalizeCircleMeanProcessor, EMAN::NormalizeEdgeMeanProcessor, EMAN::NormalizeHistPeakProcessor, EMAN::NormalizeLREdgeMeanProcessor, EMAN::NormalizeMaskProcessor, EMAN::NormalizeMaxMinProcessor, EMAN::NormalizeRampNormVar, EMAN::NormalizeRowProcessor, EMAN::NormalizeStdProcessor, EMAN::NormalizeToLeastSquareProcessor, EMAN::NormalizeUnitProcessor, EMAN::NormalizeUnitSumProcessor, EMAN::NSigmaClampingProcessor, EMAN::ObjDensityProcessor, EMAN::ObjLabelProcessor, EMAN::OctahedralSym, EMAN::OptimumOrientationGenerator, EMAN::OptSubCmp, EMAN::OptVarianceCmp, EMAN::OutlierProcessor, EMAN::PaintProcessor, EMAN::PawelProjector, EMAN::PeakOnlyProcessor, EMAN::PhaseCmp, EMAN::PhaseToCenterProcessor, EMAN::PhaseToCornerProcessor, EMAN::PhaseToMassCenterProcessor, EMAN::PolyMaskProcessor, EMAN::PruneSkeletonProcessor, EMAN::QuadMinDotCmp, EMAN::RadialProcessor, EMAN::RampProcessor, EMAN::RandomOrientationGenerator, EMAN::RangeThresholdProcessor, EMAN::RangeZeroProcessor, EMAN::RealMedianReconstructor, EMAN::RealToFFTProcessor, EMAN::RecipCarefullyProcessor, EMAN::Refine3DAlignerGrid, EMAN::Refine3DAlignerQuaternion, EMAN::RefineAligner, EMAN::RefineAlignerCG, EMAN::ReplaceValuefromListProcessor, EMAN::ReverseProcessor, EMAN::Rotate180Processor, EMAN::RotateFlipAligner, EMAN::RotateFlipAlignerIterative, EMAN::RotateInFSProcessor, EMAN::RotatePrecenterAligner, EMAN::RotateTranslateAligner, EMAN::RotateTranslateAlignerBispec, EMAN::RotateTranslateAlignerIterative, EMAN::RotateTranslateAlignerPawel, EMAN::RotateTranslateBestAligner, EMAN::RotateTranslateFlipAligner, EMAN::RotateTranslateFlipAlignerIterative, EMAN::RotateTranslateFlipAlignerPawel, EMAN::RotateTranslateFlipScaleAligner, EMAN::RotateTranslateFlipScaleAlignerIterative, EMAN::RotateTranslateScaleAligner, EMAN::RotateTranslateScaleAlignerIterative, EMAN::RotationalAligner, EMAN::RotationalAlignerBispec, EMAN::RotationalAlignerIterative, EMAN::RotationalAverageProcessor, EMAN::RotationalSubstractProcessor, EMAN::RT2Dto3DTreeAligner, EMAN::RT2DTreeAligner, EMAN::RT3DGridAligner, EMAN::RT3DLocalTreeAligner, EMAN::RT3DSphereAligner, EMAN::RT3DSymmetryAligner, EMAN::RT3DTreeAligner, EMAN::RTFExhaustiveAligner, EMAN::RTFSlowExhaustiveAligner, EMAN::SaffOrientationGenerator, EMAN::ScaleAligner, EMAN::ScaleTransformProcessor, EMAN::SDGDProcessor, EMAN::SegmentSubunitProcessor, EMAN::SetBitsProcessor, EMAN::SetIsoPowProcessor, EMAN::SetSFProcessor, EMAN::ShapeAnalyzer, EMAN::SigmaAverager, EMAN::SigmaProcessor, EMAN::SigmaZeroEdgeProcessor, EMAN::SingleOrientationGenerator, EMAN::SmartMaskProcessor, EMAN::SNREvalProcessor, EMAN::SNRProcessor, EMAN::SqEuclideanCmp, EMAN::StandardProjector, EMAN::StripeXYProcessor, EMAN::SubtractOptProcessor, EMAN::SVDAnalyzer, EMAN::SymAlignProcessor, EMAN::SymAlignProcessorQuat, EMAN::SymSearchProcessor, EMAN::TestImageAxes, EMAN::TestImageCirclesphere, EMAN::TestImageCylinder, EMAN::TestImageDisc, EMAN::TestImageEllipse, EMAN::TestImageFourierGaussianBand, EMAN::TestImageFourierNoiseGaussian, EMAN::TestImageFourierNoiseProfile, EMAN::TestImageGaussian, EMAN::TestImageGradient, EMAN::TestImageHollowEllipse, EMAN::TestImageLineWave, EMAN::TestImageNoiseGauss, EMAN::TestImageNoiseUniformRand, EMAN::TestImagePureGaussian, EMAN::TestImageScurve, EMAN::TestImageSinewave, EMAN::TestImageSinewaveCircular, EMAN::TestImageSphericalWave, EMAN::TestImageSquarecube, EMAN::TestTomoImage, EMAN::TetrahedralSym, EMAN::ToCenterProcessor, EMAN::ToMassCenterProcessor, EMAN::ToMinvalProcessor, EMAN::TomoAverager, EMAN::TomoCccCmp, EMAN::TomoFscCmp, EMAN::TomoTiltAngleWeightProcessor, EMAN::TomoTiltEdgeMaskProcessor, EMAN::TomoWedgeCccCmp, EMAN::TomoWedgeFscCmp, EMAN::ToZeroProcessor, EMAN::TransformProcessor, EMAN::TranslationalAligner, EMAN::TransposeProcessor, EMAN::ValuePowProcessor, EMAN::ValueSqrtProcessor, EMAN::ValueSquaredProcessor, EMAN::VerticalCmp, EMAN::VerticalStripeProcessor, EMAN::WatershedProcessor, EMAN::WaveletProcessor, EMAN::WedgeFillProcessor, EMAN::Wiener2DAutoAreaProcessor, EMAN::Wiener2DFourierProcessor, EMAN::WienerFourierReconstructor, EMAN::XGradientProcessor, EMAN::XYZAligner, EMAN::XYZAverager, EMAN::XYZCmp, EMAN::XYZProcessor, EMAN::XYZProjector, EMAN::XYZReconstructor, EMAN::YGradientProcessor, EMAN::ZeroConstantProcessor, EMAN::ZeroEdgePlaneProcessor, EMAN::ZeroEdgeRowProcessor, EMAN::ZGradientProcessor, EMAN::ZThicknessProcessor
new_nx : EMAN::EMData::ClipInplaceVariables
new_ny : EMAN::EMData::ClipInplaceVariables
new_nz : EMAN::EMData::ClipInplaceVariables
new_x_left : EMAN::EMData::ClipInplaceVariables
new_x_right : EMAN::EMData::ClipInplaceVariables
new_y_back : EMAN::EMData::ClipInplaceVariables
new_y_front : EMAN::EMData::ClipInplaceVariables
new_z_bottom : EMAN::EMData::ClipInplaceVariables
new_z_top : EMAN::EMData::ClipInplaceVariables
newfile_store() : EMAN::newfile_store
next : EMAN::MrcIO::FeiMrcHeader, wustl_mm::SkeletonMaker::gridQueueEle
NFLOAT_PER_LINE : EMAN::SitusIO, EMAN::XplorIO
nhalf : EMAN::ImagicIO::ImagicHeader
nhistrec : EMAN::SpiderIO::SpiderHeader
niactive : EMAN::ImagicIO2::Imagic4D
NIMA : EMAN::CUDA_Aligner, EMAN::CUDA_multiref_aligner
nimg : EMAN::CtfCAutoAverager, EMAN::CtfCWautoAverager, EMAN::CtfWtAverager, EMAN::CtfWtFiltAverager, EMAN::FourierWeightAverager, EMAN::ImageAverager, EMAN::LocalWeightAverager, EMAN::LstFastIO, EMAN::LstIO, EMAN::MinMaxAverager, EMAN::PifIO::PifFileHeader, EMAN::SerIO, EMAN::SigmaAverager, EMAN::SVDAnalyzer, EMAN::TomoAverager
nlabels : EMAN::MrcIO::MrcHeader
nlabl : EMAN::MrcIO::FeiMrcHeader
nlines_in_header : EMAN::XplorIO
nmetric : EMAN::ImagicIO2::Imagic4D
nn : EMAN::MarchingCubes, EMAN::U3DWriter
nn4_ctf_rectReconstructor() : EMAN::nn4_ctf_rectReconstructor
nn4_ctfReconstructor() : EMAN::nn4_ctfReconstructor
nn4_ctfwReconstructor() : EMAN::nn4_ctfwReconstructor
nn4_ctfwsReconstructor() : EMAN::nn4_ctfwsReconstructor
nn4_rectReconstructor() : EMAN::nn4_rectReconstructor
nn4Reconstructor() : EMAN::nn4Reconstructor
nnSSNR_ctfReconstructor() : EMAN::nnSSNR_ctfReconstructor
nnSSNR_Reconstructor() : EMAN::nnSSNR_Reconstructor
noise1 : EMAN::EMAN1Ctf
noise2 : EMAN::EMAN1Ctf
noise3 : EMAN::EMAN1Ctf
noise4 : EMAN::EMAN1Ctf
NON_RASTER_SCAN : EMAN::SalIO
nonconvex() : EMAN::Util
norm : EMAN::FourierPixelInserter3D, EMAN::Quaternion
norm_image : EMAN::TomoAverager
normalize() : EMAN::MorphologicalProcessor, EMAN::Quaternion, EMAN::RealPixelProcessor, EMAN::Vec2< Type >, EMAN::Vec3< Type >, EMAN::Vec4< Type >, EMAN::Vector3, EMAN::Vector4
normalize_threed() : EMAN::ReconstructorVolumeData
normimage : EMAN::FourierWeightAverager, EMAN::ImageAverager, EMAN::LocalWeightAverager, EMAN::SigmaAverager
not_used1 : EMAN::EmIO::EMHeader
nowslice : EMAN::TomoObject
npeaks : EMAN::PeakOnlyProcessor
NREF : EMAN::CUDA_multiref_aligner
NRING : EMAN::CUDA_Aligner, EMAN::CUDA_multiref_aligner
nrow : EMAN::SpiderIO::SpiderHeader
nsam : EMAN::SpiderIO::SpiderHeader
NSigmaClampingProcessor() : EMAN::NSigmaClampingProcessor
nslice : EMAN::SpiderIO::SpiderHeader
nsofar : EMAN::SVDAnalyzer
nsymbt : EMAN::MrcIO::FeiMrcHeader, EMAN::MrcIO::MrcHeader, EMAN::PifIO::PifImageHeader
ntotbuf : EMAN::ImagicIO::ImagicHeader
NULL_DATA : EMAN::Gatan::DataType, EMAN::GatanDM4::DataType
num : EMAN::ImagicIO::ImagicHeader
NUM_4BYTES_AFTER_IXOLD : EMAN::ImagicIO2, EMAN::ImagicIO
NUM_4BYTES_AFTER_MAP : EMAN::MrcIO
NUM_4BYTES_AFTER_NAME : EMAN::ImagicIO2
NUM_4BYTES_AFTER_SPACE : EMAN::ImagicIO
NUM_4BYTES_PRE_IXOLD : EMAN::ImagicIO
NUM_4BYTES_PRE_IYLP : EMAN::ImagicIO2
NUM_4BYTES_PRE_MAP : EMAN::MrcIO
num_bits : EMAN::BitReader< T, BIT_OVERFLOW, U >
NUM_FLOATS_IN_HEADER : EMAN::SpiderIO
num_frames : EMAN::EerIO
NUM_ID_INT : EMAN::DM3IO, EMAN::DM4IO
num_images_found : EMAN::GatanDM4::TagTable
num_pix() : EMAN::Decoder, EMAN::DecoderIx< I >
num_triangles : EMAN::Symmetry3D
number_of_element() : EMAN::Vec2< Type >, EMAN::Vec3< Type >, EMAN::Vec4< Type >
NumberDimensions : EMAN::SerIO::SerHeader
numcls : EMAN::ImagicIO2::Imagic4D
numeigen : EMAN::ImagicIO2::Imagic4D
numEles : wustl_mm::SkeletonMaker::GridQueue2, wustl_mm::SkeletonMaker::GridQueue
numfloats : EMAN::MrcIO::FeiMrcHeader
numintegers : EMAN::MrcIO::FeiMrcHeader
Numrinit() : EMAN::PolarData
nvec : EMAN::SVDAnalyzer
nx : EMAN::AmiraIO, EMAN::AreaProcessor, EMAN::CoordinateProcessor
NX : EMAN::CUDA_Aligner, EMAN::CUDA_multiref_aligner
nx : EMAN::Df3IO, EMAN::EMData, EMAN::EmIO::EMHeader, EMAN::FitsIO, EMAN::FourierPixelInserter3D, EMAN::Gatan2IO::Gatan2Header, EMAN::IcosIO::IcosHeader, EMAN::ImagicIO2::Imagic4D, EMAN::ImagicIO::ImagicHeader, EMAN::MrcIO::FeiMrcHeader, EMAN::MrcIO::MrcHeader, EMAN::OmapIO::OmapHeader, EMAN::PgmIO, EMAN::PifIO::PifFileHeader, EMAN::PifIO::PifImageHeader, EMAN::ReconstructorVolumeData, EMAN::SalIO, EMAN::SerIO, EMAN::SitusIO, EMAN::TestImageProcessor, EMAN::V4L2IO, EMAN::VtkIO, EMAN::XplorIO, EMAN::XYZReconstructor, EMDataForCuda
nx2 : EMAN::FourierPixelInserter3D, EMAN::ReconstructorVolumeData
nxstart : EMAN::MrcIO::FeiMrcHeader, EMAN::MrcIO::MrcHeader
nxy : EMAN::EMData
nxyz : EMAN::EMData, EMAN::FourierPixelInserter3D
ny : EMAN::AmiraIO, EMAN::AreaProcessor, EMAN::CoordinateProcessor
NY : EMAN::CUDA_Aligner, EMAN::CUDA_multiref_aligner
ny : EMAN::Df3IO, EMAN::EMData, EMAN::EmIO::EMHeader, EMAN::FitsIO, EMAN::FourierPixelInserter3D, EMAN::Gatan2IO::Gatan2Header, EMAN::IcosIO::IcosHeader, EMAN::ImagicIO2::Imagic4D, EMAN::ImagicIO::ImagicHeader, EMAN::MrcIO::FeiMrcHeader, EMAN::MrcIO::MrcHeader, EMAN::OmapIO::OmapHeader, EMAN::PgmIO, EMAN::PifIO::PifFileHeader, EMAN::PifIO::PifImageHeader, EMAN::ReconstructorVolumeData, EMAN::SalIO, EMAN::SerIO, EMAN::SitusIO, EMAN::TestImageProcessor, EMAN::V4L2IO, EMAN::VtkIO, EMAN::XplorIO, EMAN::XYZReconstructor, EMDataForCuda
ny2 : EMAN::FourierPixelInserter3D, EMAN::ReconstructorVolumeData
nystart : EMAN::MrcIO::FeiMrcHeader, EMAN::MrcIO::MrcHeader
nz : EMAN::AmiraIO, EMAN::AreaProcessor, EMAN::CoordinateProcessor, EMAN::Df3IO, EMAN::EMData, EMAN::EmIO::EMHeader, EMAN::FitsIO, EMAN::FourierPixelInserter3D, EMAN::IcosIO::IcosHeader, EMAN::ImagicIO2, EMAN::ImagicIO, EMAN::MrcIO::FeiMrcHeader, EMAN::MrcIO::MrcHeader, EMAN::OmapIO::OmapHeader, EMAN::PifIO::PifFileHeader, EMAN::PifIO::PifImageHeader, EMAN::ReconstructorVolumeData, EMAN::SerIO, EMAN::SitusIO, EMAN::TestImageProcessor, EMAN::VtkIO, EMAN::XplorIO, EMAN::XYZReconstructor, EMDataForCuda
nz2 : EMAN::FourierPixelInserter3D, EMAN::ReconstructorVolumeData
nzstart : EMAN::MrcIO::FeiMrcHeader, EMAN::MrcIO::MrcHeader