Here is a list of all class members with links to the classes they belong to:
- p -
- PACKED_DATA : EMAN::Gatan::DataType, EMAN::GatanDM4::DataType
- pad : EMAN::PifIO::PifFileHeader, EMAN::PifIO::PifImageHeader, wustl_mm::SkeletonMaker::Volume
- Pad() : wustl_mm::SkeletonMaker::VolumeData
- PaintProcessor() : EMAN::PaintProcessor
- Pair() : EMAN::XYData::Pair
- parameters : EMAN::EmIO::EMHeader
- params : EMAN::Aligner, EMAN::Analyzer, EMAN::Averager, EMAN::Cmp, EMAN::FactoryBase, EMAN::Processor, EMAN::Projector
- params_match() : EMAN::EMFTGL::EMFTGLFontInstance
- parent_group : EMAN::Gatan::TagEntry, EMAN::GatanDM4::TagEntry
- path : EMAN::EMData
- pathnum : EMAN::EMData
- pcoher : EMAN::ImagicIO2::Imagic4D
- pdb2mrc_by_nfft() : EMAN::PointArray
- pdb2mrc_by_summation() : EMAN::PointArray
- PDBReader() : EMAN::PDBReader
- peak : CudaPeakInfo, CudaPeakInfoFloat
- PEAKS_DIV : EMAN::PDBReader, EMAN::PointArray
- PEAKS_SUB : EMAN::PDBReader, EMAN::PointArray
- PerformPureJuSkeletonization() : wustl_mm::GraySkeletonCPP::VolumeSkeletonizer
- permissable_2d_not_rot : EMAN::Transform
- permissable_3d_not_rot : EMAN::Transform
- permissable_rot_keys : EMAN::Transform
- pfh : EMAN::PifIO
- PGM_ASCII : EMAN::PgmIO
- PGM_BINARY : EMAN::PgmIO
- PGM_UNKNOWN_FILE : EMAN::PgmIO
- PgmIO() : EMAN::PgmIO
- pgroup : EMAN::ImagicIO2::Imagic4D
- phi : EMAN::GaussFFTProjector, EMAN::SpiderIO::SpiderHeader
- phi1 : EMAN::SpiderIO::SpiderHeader
- phi2 : EMAN::SpiderIO::SpiderHeader
- pi : EMAN::EMConsts
- PIF_BOXED_DATA : EMAN::PifIO
- PIF_BOXED_FLOAT_INT : EMAN::PifIO
- PIF_CHAR : EMAN::PifIO
- PIF_FLOAT : EMAN::PifIO
- PIF_FLOAT_COMPLEX : EMAN::PifIO
- PIF_FLOAT_INT : EMAN::PifIO
- PIF_FLOAT_INT_COMPLEX : EMAN::PifIO
- PIF_INVALID : EMAN::PifIO
- PIF_MAGIC_NUM : EMAN::PifIO
- PIF_MAP_FLOAT_INT : EMAN::PifIO
- PIF_MAP_FLOAT_INT_2 : EMAN::PifIO
- PIF_MAP_FLOAT_SHORT : EMAN::PifIO
- PIF_SHORT : EMAN::PifIO
- PIF_SHORT_COMPLEX : EMAN::PifIO
- PIF_SHORT_FLOAT : EMAN::PifIO
- PIF_SHORT_FLOAT_COMPLEX : EMAN::PifIO
- PifDataMode : EMAN::PifIO
- PifIO() : EMAN::PifIO
- pix : WSsortlist
- pixel : EMAN::AmiraIO
- Pixel() : EMAN::Pixel
- pixel : EMAN::SalIO
- pixel_at() : EMAN::FourierReconstructor, EMAN::WienerFourierReconstructor
- pixel_size : EMAN::MrcIO::FeiMrcExtHeader
- pixels : EMAN::ImagicIO::ImagicHeader, EMAN::SVDAnalyzer
- PIXMAP : EMAN::EMFTGL
- platonic_alt_lower_bound() : EMAN::PlatonicSym
- platonic_params : EMAN::PlatonicSym
- PlatonicSym() : EMAN::PlatonicSym
- POINT2_FLOAT32_0_DATA : EMAN::Gatan::DataType, EMAN::GatanDM4::DataType
- POINT2_SINT16_0_DATA : EMAN::Gatan::DataType, EMAN::GatanDM4::DataType
- POINT2_SINT16_1_DATA : EMAN::Gatan::DataType, EMAN::GatanDM4::DataType
- POINT2_SINT32_0_DATA : EMAN::Gatan::DataType, EMAN::GatanDM4::DataType
- Point3() : EMAN::Point3
- point_in_which_asym_unit() : EMAN::Symmetry3D
- point_is_in_convex_polygon_2d() : EMAN::Util
- point_is_in_triangle_2d() : EMAN::Util
- point_map : EMAN::MarchingCubes
- PointArray() : EMAN::PointArray
- pointInfo : EMAN::PDBReader
- pointRadius : wustl_mm::GraySkeletonCPP::VolumeSkeletonizer
- points : EMAN::PDBReader, EMAN::PointArray
- PolarData() : EMAN::PolarData
- POLYDATA : EMAN::VtkIO
- POLYGON : EMAN::EMFTGL
- PolyMaskProcessor() : EMAN::PolyMaskProcessor
- popQueue() : wustl_mm::SkeletonMaker::GridQueue
- pos2 : EMAN::point_t
- posTime : EMAN::SerIO
- pp : EMAN::MarchingCubes, EMAN::U3DWriter
- pre : wustl_mm::SkeletonMaker::GridQueue2
- prepcubes() : EMAN::PawelProjector
- prepend() : wustl_mm::SkeletonMaker::GridQueue2
- prepre : wustl_mm::SkeletonMaker::GridQueue2
- preprocess() : EMAN::FourierAnlProcessor, EMAN::FourierProcessor, EMAN::HighpassAutoPeakProcessor, EMAN::LowpassAutoBProcessor, EMAN::TestImageProcessor
- preprocess_slice() : EMAN::BackProjectionReconstructor, EMAN::FourierIterReconstructor, EMAN::FourierReconstructor, EMAN::RealMedianReconstructor, EMAN::Reconstructor
- print() : EMAN::Matrix3, EMAN::Matrix4, EMAN::Point3, EMAN::ScreenPoint, EMAN::ScreenVector, EMAN::Vector3, EMAN::Vector4
- print_generator_type() : EMAN::Randnum
- print_params() : EMAN::Reconstructor
- printInfo() : EMAN::EMObject
- printMatI3D() : EMAN::Util
- printme() : EMAN::Transform
- PriorityQueue() : EMAN::PriorityQueue< ValueT, KeyT >
- process() : EMAN::AmpMultProcessor, EMAN::ApplySymProcessor, EMAN::BinaryBlackHatProcessor, EMAN::BinaryClosingProcessor, EMAN::BinaryDilationProcessor, EMAN::BinaryErosionProcessor, EMAN::BinaryExternalGradientProcessor, EMAN::BinaryInternalGradientProcessor, EMAN::BinaryMorphGradientProcessor, EMAN::BinaryOpeningProcessor, EMAN::BinarySkeletonizerProcessor, EMAN::BinaryTopHatProcessor, EMAN::BispecSliceProcessor, EMAN::BooleanShrinkProcessor, EMAN::BoxStatProcessor, EMAN::BwThinningProcessor, EMAN::CircularAverageBinarizeProcessor, EMAN::ConvolutionKernelProcessor, EMAN::CtfSimProcessor, EMAN::DirectionalSumProcessor, EMAN::DistanceSegmentProcessor, EMAN::EnhanceProcessor, EMAN::FFTResampleProcessor, EMAN::FSCFourierProcessor, EMAN::GaussSegmentProcessor, EMAN::GrowSkeletonProcessor, EMAN::HarmonicProcessor, EMAN::IntTranslateProcessor, EMAN::KmeansSegmentProcessor, EMAN::ManhattanDistanceProcessor, EMAN::MaskPackProcessor, EMAN::MaxShrinkProcessor, EMAN::MeanShrinkProcessor, EMAN::MedianShrinkProcessor, EMAN::MinShrinkProcessor, EMAN::ObjDensityProcessor, EMAN::ObjLabelProcessor, EMAN::Processor, EMAN::PruneSkeletonProcessor, EMAN::RotateInFSProcessor, EMAN::ScaleTransformProcessor, EMAN::SubtractOptProcessor, EMAN::TransformProcessor, EMAN::TransposeProcessor, EMAN::WatershedProcessor, EMAN::Wiener2DAutoAreaProcessor, EMAN::Wiener2DFourierProcessor, EMAN::ZThicknessProcessor
- process_ascii_region_io() : EMAN::EMUtil
- process_dist_pixel() : EMAN::CircularMaskProcessor, EMAN::MakeRadiusProcessor, EMAN::MakeRadiusSquaredProcessor, EMAN::MaskEdgeMeanProcessor, EMAN::MaskGaussInvProcessor, EMAN::MaskGaussProcessor, EMAN::MaskNoiseProcessor, EMAN::MaskSharpProcessor, EMAN::MaskSoftProcessor, EMAN::RadialProcessor
- process_inplace() : EMAN::ACFCenterProcessor, EMAN::AddMaskShellProcessor, EMAN::AddNoiseProcessor, EMAN::AddRandomNoiseProcessor, EMAN::AddShapeProcessor, EMAN::AmpMultProcessor, EMAN::AmpweightFourierProcessor, EMAN::ApplyPolynomialProfileToHelix, EMAN::ApplySymProcessor, EMAN::AreaProcessor, EMAN::AutoMask2DProcessor, EMAN::AutoMask3D2Processor, EMAN::AutoMask3DProcessor, EMAN::AutoMaskAsymUnit, EMAN::AutoMaskDustProcessor, EMAN::AverageXProcessor, EMAN::Axis0FourierProcessor, EMAN::AzSharpProcessor, EMAN::BadLineXYProcessor, EMAN::BeamstopProcessor, EMAN::BilateralProcessor, EMAN::BinarizeFourierProcessor, EMAN::BinaryBlackHatProcessor, EMAN::BinaryClosingProcessor, EMAN::BinaryDilationProcessor, EMAN::BinaryErosionProcessor, EMAN::BinaryExternalGradientProcessor, EMAN::BinaryInternalGradientProcessor, EMAN::BinaryMorphGradientProcessor, EMAN::BinaryOpeningProcessor, EMAN::BinaryOperateProcessor< Type >, EMAN::BinarySkeletonizerProcessor, EMAN::BinaryTopHatProcessor, EMAN::BispecSliceProcessor, EMAN::BooleanShrinkProcessor, EMAN::BoxStatProcessor, EMAN::BwThinningProcessor, EMAN::CCCSNRProcessor, EMAN::CCDNormProcessor, EMAN::CircularAverageBinarizeProcessor, EMAN::ClampingProcessor, EMAN::ComplexPixelProcessor, EMAN::ConvolutionKernelProcessor, EMAN::ConvolutionProcessor, EMAN::CoordinateProcessor, EMAN::CTFCorrProcessor, EMAN::CtfSimProcessor, EMAN::CTFSNRWeightProcessor, EMAN::CutoffBlockProcessor, EMAN::DecayEdgeProcessor, EMAN::DiffBlockProcessor, EMAN::DirectionalSumProcessor, EMAN::DistanceSegmentProcessor, EMAN::EnhanceProcessor, EMAN::FFTConeProcessor, EMAN::FFTPeakProcessor, EMAN::FFTProcessor, EMAN::FFTResampleProcessor, EMAN::FFTWedgeProcessor, EMAN::FileFourierProcessor, EMAN::FlattenBackgroundProcessor, EMAN::FlipProcessor, EMAN::FourierAnlProcessor, EMAN::FourierProcessor, EMAN::FourierToCenterProcessor, EMAN::FourierToCornerProcessor, EMAN::FSCFourierProcessor, EMAN::GaussSegmentProcessor, EMAN::GaussZFourierProcessor, EMAN::GradientDirectionProcessor, EMAN::GradientMagnitudeProcessor, EMAN::GradientPlaneRemoverProcessor, EMAN::GradientRemoverProcessor, EMAN::GridKernelFixProcessor, EMAN::GrowSkeletonProcessor, EMAN::HarmonicProcessor, EMAN::HistogramBin, EMAN::ImageDivergenceProcessor, EMAN::ImageProcessor, EMAN::IndexMaskFileProcessor, EMAN::IntTranslateProcessor, EMAN::IterBinMaskProcessor, EMAN::IterMultiMaskProcessor, EMAN::KmeansSegmentProcessor, EMAN::LaplacianDirectionProcessor, EMAN::LaplacianMagnitudeProcessor, EMAN::LaplacianProcessor, EMAN::LinearPyramidProcessor, EMAN::LocalNormProcessor, EMAN::LowpassRandomPhaseProcessor, EMAN::ManhattanDistanceProcessor, EMAN::MaskAzProcessor, EMAN::MaskPackProcessor, EMAN::MaxShrinkProcessor, EMAN::MeanShrinkProcessor, EMAN::MeanZeroEdgeProcessor, EMAN::MedianShrinkProcessor, EMAN::MinShrinkProcessor, EMAN::ModelEMCylinderProcessor, EMAN::MorphologicalProcessor, EMAN::NonConvexProcessor, EMAN::NormalizeByMassProcessor, EMAN::NormalizeMaskProcessor, EMAN::NormalizeProcessor, EMAN::NormalizeRampNormVar, EMAN::NormalizeRowProcessor, EMAN::NormalizeToLeastSquareProcessor, EMAN::NSigmaClampingProcessor, EMAN::ObjDensityProcessor, EMAN::ObjLabelProcessor, EMAN::OutlierProcessor, EMAN::PaintProcessor, EMAN::PhaseToCenterProcessor, EMAN::PhaseToCornerProcessor, EMAN::PhaseToMassCenterProcessor, EMAN::Processor, EMAN::PruneSkeletonProcessor, EMAN::RampProcessor, EMAN::RangeZeroProcessor, EMAN::RealPixelProcessor, EMAN::RealToFFTProcessor, EMAN::ReverseProcessor, EMAN::Rotate180Processor, EMAN::RotateInFSProcessor, EMAN::RotationalAverageProcessor, EMAN::RotationalSubstractProcessor, EMAN::ScaleTransformProcessor, EMAN::SDGDProcessor, EMAN::SegmentSubunitProcessor, EMAN::SetBitsProcessor, EMAN::SetIsoPowProcessor, EMAN::SigmaZeroEdgeProcessor, EMAN::SmartMaskProcessor, EMAN::SNREvalProcessor, EMAN::SNRProcessor, EMAN::StripeXYProcessor, EMAN::SubtractOptProcessor, EMAN::SymSearchProcessor, EMAN::TestImageAxes, EMAN::TestImageCirclesphere, EMAN::TestImageCylinder, EMAN::TestImageDisc, EMAN::TestImageEllipse, EMAN::TestImageFourierGaussianBand, EMAN::TestImageFourierNoiseGaussian, EMAN::TestImageFourierNoiseProfile, EMAN::TestImageGaussian, EMAN::TestImageGradient, EMAN::TestImageHollowEllipse, EMAN::TestImageLineWave, EMAN::TestImageNoiseGauss, EMAN::TestImageNoiseUniformRand, EMAN::TestImagePureGaussian, EMAN::TestImageScurve, EMAN::TestImageSinewave, EMAN::TestImageSinewaveCircular, EMAN::TestImageSphericalWave, EMAN::TestImageSquarecube, EMAN::TestTomoImage, EMAN::ToCenterProcessor, EMAN::ToMassCenterProcessor, EMAN::ToMinvalProcessor, EMAN::TomoTiltAngleWeightProcessor, EMAN::TomoTiltEdgeMaskProcessor, EMAN::TransformProcessor, EMAN::TransposeProcessor, EMAN::VerticalStripeProcessor, EMAN::WatershedProcessor, EMAN::WaveletProcessor, EMAN::WedgeFillProcessor, EMAN::Wiener2DAutoAreaProcessor, EMAN::Wiener2DFourierProcessor, EMAN::XGradientProcessor, EMAN::XYZProcessor, EMAN::YGradientProcessor, EMAN::ZeroEdgePlaneProcessor, EMAN::ZeroEdgeRowProcessor, EMAN::ZGradientProcessor, EMAN::ZThicknessProcessor
- process_lines_io() : EMAN::EMUtil
- process_list_inplace() : EMAN::Processor
- process_numbers_io() : EMAN::EMUtil
- process_pixel() : EMAN::AboveToZeroProcessor, EMAN::AbsoluteValueProcessor, EMAN::AreaProcessor, EMAN::BinarizeProcessor, EMAN::BooleanProcessor, EMAN::BoxMaxProcessor, EMAN::BoxMedianProcessor, EMAN::BoxSigmaProcessor, EMAN::BoxStatProcessor, EMAN::BwMajorityProcessor, EMAN::BwThinningProcessor, EMAN::CircularMaskProcessor, EMAN::CollapseProcessor, EMAN::ComplexNormPixel, EMAN::ComplexPixelProcessor, EMAN::CoordinateProcessor, EMAN::CutToZeroProcessor, EMAN::DiscritizeProcessor, EMAN::ExpProcessor, EMAN::FiniteProcessor, EMAN::FixSignProcessor, EMAN::FloorValueProcessor, EMAN::LinearXformProcessor, EMAN::LocalMinAbsProcessor, EMAN::LogProcessor, EMAN::MaskGaussNonuniformProcessor, EMAN::MinusPeakProcessor, EMAN::MorphologicalProcessor, EMAN::PeakOnlyProcessor, EMAN::PolyMaskProcessor, EMAN::RangeThresholdProcessor, EMAN::RealPixelProcessor, EMAN::RecipCarefullyProcessor, EMAN::ReplaceValuefromListProcessor, EMAN::SigmaProcessor, EMAN::ToZeroProcessor, EMAN::ValuePowProcessor, EMAN::ValueSqrtProcessor, EMAN::ValueSquaredProcessor, EMAN::ZeroConstantProcessor
- process_region_io() : EMAN::EMUtil
- progname : EMAN::TestUtil
- program : EMAN::PifIO::PifFileHeader
- project3d() : EMAN::ChaoProjector, EMAN::FourierGriddingProjector, EMAN::GaussFFTProjector, EMAN::MaxValProjector, EMAN::PawelProjector, EMAN::Projector, EMAN::StandardProjector, EMAN::XYZProjector
- projection() : EMAN::FourierReconstructor, EMAN::Reconstructor
- projection_by_nfft() : EMAN::PointArray
- projection_by_summation() : EMAN::PointArray
- PruneCurves() : wustl_mm::GraySkeletonCPP::VolumeSkeletonizer
- PruneSurfaces() : wustl_mm::GraySkeletonCPP::VolumeSkeletonizer
- PRUNING_CLASS_PRUNE_CURVES : wustl_mm::GraySkeletonCPP::VolumeSkeletonizer
- PRUNING_CLASS_PRUNE_POINTS : wustl_mm::GraySkeletonCPP::VolumeSkeletonizer
- PRUNING_CLASS_PRUNE_SURFACES : wustl_mm::GraySkeletonCPP::VolumeSkeletonizer
- prv_nx : EMAN::EMData::ClipInplaceVariables
- prv_ny : EMAN::EMData::ClipInplaceVariables
- prv_nz : EMAN::EMData::ClipInplaceVariables
- prv_x_left : EMAN::EMData::ClipInplaceVariables
- prv_x_right : EMAN::EMData::ClipInplaceVariables
- prv_y_back : EMAN::EMData::ClipInplaceVariables
- prv_y_front : EMAN::EMData::ClipInplaceVariables
- prv_z_bottom : EMAN::EMData::ClipInplaceVariables
- prv_z_top : EMAN::EMData::ClipInplaceVariables
- pseq : BPKT
- psi1 : EMAN::SpiderIO::SpiderHeader
- psi2 : EMAN::SpiderIO::SpiderHeader
- ptid : EMAN::TomoObject
- push_back() : EMAN::CustomVector< type >
- push_back_3() : EMAN::CustomVector< type >
- pushQueue() : wustl_mm::SkeletonMaker::GridQueue
- put() : EMAN::Dict, EMAN::TypeDict
- pWords : EMAN::PDBReader
- pwr : EMAN::ValuePowProcessor
- px : CudaPeakInfo
- py : CudaPeakInfo
- pz : CudaPeakInfo